Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   J6600_RS07185 Genome accession   NZ_CP072563
Coordinates   1394682..1395278 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus sp. LJBV19     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1389682..1400278
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J6600_RS07155 (J6600_07155) - 1389897..1390352 (+) 456 WP_007409622.1 flavodoxin -
  J6600_RS07160 (J6600_07160) dapD 1390434..1391144 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  J6600_RS07165 (J6600_07165) - 1391215..1392339 (+) 1125 WP_017417680.1 N-acetyldiaminopimelate deacetylase -
  J6600_RS07170 (J6600_07170) - 1392400..1392645 (+) 246 WP_209388184.1 YkuS family protein -
  J6600_RS07175 (J6600_07175) - 1392678..1393484 (-) 807 WP_021493755.1 mechanosensitive ion channel family protein -
  J6600_RS07180 (J6600_07180) - 1393772..1394230 (+) 459 WP_014417617.1 TlpA disulfide reductase family protein -
  J6600_RS07185 (J6600_07185) rok 1394682..1395278 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  J6600_RS07190 (J6600_07190) - 1395299..1396291 (-) 993 WP_021493753.1 hypothetical protein -
  J6600_RS07195 (J6600_07195) - 1396437..1397039 (+) 603 WP_025649507.1 molybdenum cofactor guanylyltransferase -
  J6600_RS07200 (J6600_07200) - 1397091..1398110 (+) 1020 WP_007611113.1 molybdopterin-synthase adenylyltransferase MoeB -
  J6600_RS07205 (J6600_07205) glp 1398128..1399420 (+) 1293 WP_209388185.1 gephyrin-like molybdotransferase Glp -
  J6600_RS07210 (J6600_07210) mobB 1399381..1399902 (+) 522 WP_029973679.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=554224 J6600_RS07185 WP_003154591.1 1394682..1395278(+) (rok) [Bacillus sp. LJBV19]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=554224 J6600_RS07185 WP_003154591.1 1394682..1395278(+) (rok) [Bacillus sp. LJBV19]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCGGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACGTTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843