Detailed information NTG0554036

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: J7D37_RS08320
• Genome accession: NZ_CP072526
• Coordinates: 1712039..1712740 (+)
• Length: 233 a.a.
• NCBI ID: WP_021510829.1
• Uniprot ID: A0AAV3K023
• Organism: Acinetobacter baumannii strain DETAB-E227
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1707039..1717740

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7D37_RS08285 (J7D37_08285)	kdsB	1707562..1708323 (+)	762	WP_038348267.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
J7D37_RS08290 (J7D37_08290)	-	1708335..1709315 (+)	981	WP_038348266.1	DNA polymerase III subunit delta'	-
J7D37_RS08295 (J7D37_08295)	-	1709327..1709668 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
J7D37_RS08300 (J7D37_08300)	-	1709686..1710459 (+)	774	WP_038348265.1	TatD family hydrolase	-
J7D37_RS08305 (J7D37_08305)	-	1710497..1711105 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
J7D37_RS08310 (J7D37_08310)	-	1711115..1711669 (+)	555	WP_000841373.1	type II secretion system protein	-
J7D37_RS08315 (J7D37_08315)	xcpV	1711659..1712039 (+)	381	WP_038348264.1	type II secretion system minor pseudopilin GspI	Machinery gene
J7D37_RS08320 (J7D37_08320)	xcpW	1712039..1712740 (+)	702	WP_021510829.1	type II secretion system minor pseudopilin GspJ	Machinery gene
J7D37_RS08325 (J7D37_08325)	gspK	1712740..1713699 (+)	960	WP_038348263.1	type II secretion system minor pseudopilin GspK	-
J7D37_RS08330 (J7D37_08330)	-	1713929..1714525 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
J7D37_RS08335 (J7D37_08335)	ung	1714576..1715289 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
J7D37_RS08340 (J7D37_08340)	-	1715286..1716410 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
J7D37_RS08345 (J7D37_08345)	tadA	1716417..1716920 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
J7D37_RS08350 (J7D37_08350)	-	1716990..1717433 (+)	444	WP_038348262.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26671.67 Da
• Isoelectric Point: 9.5501

>NTDB_id=554036 J7D37_RS08320 WP_021510829.1 1712039..1712740(+) (xcpW) [Acinetobacter baumannii strain DETAB-E227]
MIKNKYIHIRSFSSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLLLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=554036 J7D37_RS08320 WP_021510829.1 1712039..1712740(+) (xcpW) [Acinetobacter baumannii strain DETAB-E227]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTATTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATTGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.712	100	0.987