Detailed information NTG0554027

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LZ175_RS00875
• Genome accession: NZ_CP090448
• Coordinates: 178538..179521 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain PT62
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 173538..184521

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LZ175_RS00860 (LZ175_00860)	dppA	174838..176445 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
LZ175_RS00865 (LZ175_00865)	dppB	176596..177615 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LZ175_RS00870 (LZ175_00870)	dppC	177625..178527 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
LZ175_RS00875 (LZ175_00875)	amiE	178538..179521 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
LZ175_RS00880 (LZ175_00880)	dppF	179518..180522 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
LZ175_RS00885 (LZ175_00885)	yhjV	180552..181823 (-)	1272	WP_001307456.1	aromatic amino acid transport family protein	-
LZ175_RS00890 (LZ175_00890)	ldrD	182299..182406 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LZ175_RS00895 (LZ175_00895)	bcsG	182493..184172 (-)	1680	WP_040062735.1	cellulose biosynthesis protein BcsG	-
LZ175_RS00900 (LZ175_00900)	bcsF	184169..184360 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=554027 LZ175_RS00875 WP_001196486.1 178538..179521(+) (amiE) [Escherichia coli strain PT62]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=554027 LZ175_RS00875 WP_001196486.1 178538..179521(+) (amiE) [Escherichia coli strain PT62]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGATC
TGGCTCTGGTGGCGGAAGCTGCGCATAAAATCATTGTGATGTATGCCGGTCAAGTGGTGGAAACGGGCGATGCTCACGCC
ATCTTCCATGCGCCGCGTCATCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTACCTGGCGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404