Detailed information NTG0553981

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: J7W01_RS12640
• Genome accession: NZ_CP072525
• Coordinates: 2481163..2483493 (-)
• Length: 776 a.a.
• NCBI ID: WP_041850028.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain YB-04
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2476163..2488493

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7W01_RS12605 (J7W01_12605)	yqxA	2476502..2476840 (-)	339	WP_041850027.1	YqxA family protein	-
J7W01_RS12610 (J7W01_12610)	spoIIP	2476857..2478062 (-)	1206	WP_014477383.1	spore autolysin SpoIIP	-
J7W01_RS12615 (J7W01_12615)	gpr	2478125..2479231 (-)	1107	WP_014480309.1	GPR endopeptidase	-
J7W01_RS12620 (J7W01_12620)	rpsT	2479435..2479701 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
J7W01_RS12625 (J7W01_12625)	holA	2479716..2480759 (-)	1044	WP_029317888.1	DNA polymerase III subunit delta	-
J7W01_RS12630 (J7W01_12630)	-	2480799..2480948 (-)	150	WP_120363468.1	hypothetical protein	-
J7W01_RS12635 (J7W01_12635)	yqzM	2480989..2481123 (+)	135	WP_003229983.1	YqzM family protein	-
J7W01_RS12640 (J7W01_12640)	comEC	2481163..2483493 (-)	2331	WP_041850028.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
J7W01_RS12645 (J7W01_12645)	comEB	2483497..2484066 (-)	570	WP_003229978.1	ComE operon protein 2	-
J7W01_RS12650 (J7W01_12650)	comEA	2484133..2484750 (-)	618	WP_041850029.1	competence protein ComEA	Machinery gene
J7W01_RS12655 (J7W01_12655)	comER	2484834..2485655 (+)	822	WP_041850030.1	late competence protein ComER	-
J7W01_RS12660 (J7W01_12660)	yqeM	2485721..2486464 (-)	744	WP_032726197.1	class I SAM-dependent methyltransferase	-
J7W01_RS12665 (J7W01_12665)	rsfS	2486461..2486817 (-)	357	WP_003237112.1	ribosome silencing factor	-
J7W01_RS12670 (J7W01_12670)	yqeK	2486835..2487395 (-)	561	WP_014480316.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
J7W01_RS12675 (J7W01_12675)	nadD	2487385..2487954 (-)	570	WP_004398676.1	nicotinate-nucleotide adenylyltransferase	-
J7W01_RS12680 (J7W01_12680)	yhbY	2487966..2488256 (-)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86739.47 Da
• Isoelectric Point: 7.4973

>NTDB_id=553981 J7W01_RS12640 WP_041850028.1 2481163..2483493(-) (comEC) [Bacillus subtilis strain YB-04]
MRNSRLLLPMAAASATVGITAAAYFPAIFLFILFLLIILIKTRHAFLIIVCFFSFILFFVLYAVTDSQNVSSYRQGTYQF
KAVIATIPKIDGDRMSMMVKTPDKEKWAAAYRIQSAGEKEQLLYIEPGMSCELTGTLEEPKHATVPGAFDYNEYLYRQHI
HWNYSVTSIQNCSEPENFKYKVLSLRKHIISFTNSLLPPDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHV
GILTAGLFYIMIRLGITREKASILLLLFLPLYVMLTGAAPSVLRAALMSGVYLAGSLVKWRVHSATAICLSYIVLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFQQVKTSLGQLTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGA
VAGVLLLSLSASFGRLFFSWFDLLISWTNRLITKIADVDVFTIMIAHPAPVLLFLFTVTIILLLMAIEKRSLSQLMVTGG
ICCTVLFLLFIYPCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVLIDTGGTLSYSSEPWREKQHPFSLGEKMLIPFLTAKG
IKQLDALILTHADQDHIGEAETLLKHHKVKRLVIPKGFVSEPKDEKVLQTAREEGVTIEEVKRGDVLQIKDLQFHVLSPE
APDPASKNNSSLVLWMETGVLSWILTGDLEKEGEQEVMDVFPNIKADVLKVGHHGSKGSTGEEFIQQLQPKTAIISAGKN
NRYHHPHQEVLQLLQRHSIRVLRTDQNGTIQYRYKNRVGTFSVYPPYDTSDITETN

Nucleotide

• Length: 2331 bp

>NTDB_id=553981 J7W01_RS12640 WP_041850028.1 2481163..2483493(-) (comEC) [Bacillus subtilis strain YB-04]
ATGCGTAATTCGCGTTTGTTATTGCCTATGGCGGCAGCTTCGGCAACGGTTGGAATTACTGCCGCCGCTTATTTCCCCGC
TATTTTTCTTTTCATCCTCTTTCTCCTCATCATTTTAATCAAAACGAGGCACGCTTTTCTTATTATTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGTACTGTATGCAGTCACAGATTCTCAGAATGTCTCTTCCTATCGGCAGGGAACCTATCAATTC
AAGGCAGTGATTGCCACTATTCCCAAAATTGACGGCGACCGTATGTCTATGATGGTTAAGACACCTGATAAGGAAAAATG
GGCTGCTGCGTATCGCATTCAGTCTGCTGGTGAAAAAGAACAGCTGTTATACATAGAACCAGGAATGTCATGTGAGTTGA
CTGGTACATTGGAAGAACCGAAACACGCAACTGTGCCGGGTGCATTTGATTATAACGAGTATCTTTATCGGCAGCATATT
CATTGGAACTACTCTGTCACGTCTATCCAAAACTGCAGCGAACCTGAAAATTTCAAGTACAAGGTGCTCAGCTTGAGAAA
ACATATCATATCATTCACAAACAGCCTGCTGCCTCCTGATTCGGCAGGAATTGTACAGGCACTTACAGTCGGTGACAGAT
TTTATGTGGAGGATGAAGTGCTTACCGCGTATCAAAAGCTTGGTGTTGTCCATCTCTTGGCAATATCAGGACTCCACGTG
GGGATTTTGACAGCAGGTTTGTTTTATATCATGATCCGCCTTGGTATAACAAGAGAAAAGGCGTCAATTCTGTTGCTGTT
ATTTCTGCCGCTCTATGTGATGTTGACCGGCGCTGCTCCTTCAGTGCTACGCGCCGCTCTCATGTCGGGTGTTTACTTAG
CTGGAAGTCTTGTCAAATGGCGTGTCCACTCTGCAACTGCAATTTGCCTTTCATACATCGTCCTTCTGCTCTTCAATCCT
TATCATCTCTTTGAAGCCGGTTTTCAGCTATCGTTCGCCGTCAGTTTTTCTTTAATTCTATCCTCTTCTATTTTTCAGCA
GGTTAAAACCTCCTTGGGGCAGCTGACAATTGTATCACTCATCGCTCAGCTGGGCTCGCTTCCGATTCTTCTATATCATT
TTCATCAGTTTTCTATCATCAGCGTACCGATGAATATGTTGATGGTACCATTTTATACCTTCTGTATTTTGCCGGGAGCT
GTAGCAGGTGTTCTTCTATTAAGTCTTTCCGCTTCGTTTGGGAGATTGTTTTTCAGCTGGTTTGATTTATTGATAAGCTG
GACCAATAGGTTAATCACAAAAATTGCAGATGTTGATGTGTTCACGATTATGATCGCACATCCTGCACCTGTTCTGCTTT
TTTTATTCACGGTCACGATCATCCTATTGCTTATGGCGATTGAAAAACGCTCCTTGTCGCAGTTGATGGTAACCGGCGGC
ATTTGCTGCACAGTGCTGTTTCTGCTCTTTATATATCCGTGTCTTAGTTCCGAAGGAGAAGTGGATATGATAGATATTGG
ACAGGGTGACAGCATGTTTGTAGGTGCTCCGCATCAGCGGGGTCGTGTCTTAATTGATACCGGCGGCACTTTGTCTTACT
CGTCAGAGCCTTGGCGCGAAAAACAGCATCCGTTTTCACTGGGGGAAAAGATGCTGATTCCGTTTTTAACTGCTAAGGGA
ATCAAACAGCTTGACGCTTTAATTCTGACGCACGCTGACCAAGATCATATCGGAGAGGCGGAGACTCTGCTGAAGCATCA
TAAAGTAAAGCGCCTCGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGATGAGAAAGTGCTGCAGACAGCCAGAGAAG
AGGGAGTGACAATTGAAGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCTGAA
GCACCTGATCCGGCAAGCAAAAATAATTCATCTCTCGTTCTGTGGATGGAGACGGGCGTTCTGAGCTGGATCTTGACGGG
TGATCTGGAGAAAGAAGGGGAACAGGAGGTGATGGACGTGTTTCCAAATATTAAAGCAGATGTCTTAAAGGTGGGGCACC
ATGGGAGCAAAGGCTCTACCGGTGAAGAATTCATCCAACAGCTTCAGCCGAAAACGGCCATTATCTCAGCCGGGAAAAAC
AATCGGTACCATCATCCTCATCAAGAAGTTCTGCAACTATTACAGAGACATTCTATCCGCGTGCTGCGAACAGATCAAAA
CGGAACGATCCAATATAGATACAAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (208-469)

• Domain of unknown function (DUF4131) (DUF4131) (20-170)

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	97.809	100	0.978