Detailed information NTG0553939

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: J7W01_RS02110
• Genome accession: NZ_CP072525
• Coordinates: 420360..421508 (+)
• Length: 382 a.a.
• NCBI ID: WP_043940053.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain YB-04
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 415360..426508

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7W01_RS02090 (J7W01_02090)	yclH	415736..416416 (-)	681	WP_041850693.1	ABC transporter ATP-binding protein	-
J7W01_RS02095 (J7W01_02095)	yclI	416432..417892 (-)	1461	WP_041850694.1	ABC transporter permease	-
J7W01_RS02100 (J7W01_02100)	yclJ	418105..418788 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
J7W01_RS02105 (J7W01_02105)	yclK	418775..420196 (+)	1422	WP_072173981.1	two-component system sensor histidine kinase YclK	-
J7W01_RS02110 (J7W01_02110)	rapC	420360..421508 (+)	1149	WP_043940053.1	response regulator aspartate phosphatase RapC	Regulator
J7W01_RS02115 (J7W01_02115)	phrC	421492..421614 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
J7W01_RS02120 (J7W01_02120)	yczM	421716..421805 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
J7W01_RS02125 (J7W01_02125)	yczN	421887..422000 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
J7W01_RS02130 (J7W01_02130)	thrD	422154..423518 (-)	1365	WP_043940054.1	aspartate kinase	-
J7W01_RS02135 (J7W01_02135)	ceuB	423903..424853 (+)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
J7W01_RS02140 (J7W01_02140)	yclO	424846..425793 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45709.75 Da
• Isoelectric Point: 4.9618

>NTDB_id=553939 J7W01_RS02110 WP_043940053.1 420360..421508(+) (rapC) [Bacillus subtilis strain YB-04]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVFTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=553939 J7W01_RS02110 WP_043940053.1 420360..421508(+) (rapC) [Bacillus subtilis strain YB-04]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTTCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.476	100	0.995
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568