Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   J7445_RS07410 Genome accession   NZ_CP072524
Coordinates   1570282..1570749 (+) Length   155 a.a.
NCBI ID   WP_209282877.1    Uniprot ID   -
Organism   Neisseria sicca strain NS20201025     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1565282..1575749
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7445_RS07385 (J7445_07385) - 1565814..1566350 (+) 537 WP_019270852.1 gamma carbonic anhydrase family protein -
  J7445_RS07390 (J7445_07390) - 1566390..1566989 (+) 600 WP_209282873.1 nucleoside triphosphate pyrophosphatase -
  J7445_RS07395 (J7445_07395) - 1567015..1567629 (+) 615 WP_209282874.1 hypothetical protein -
  J7445_RS07400 (J7445_07400) - 1567711..1568976 (-) 1266 WP_209282875.1 Glu/Leu/Phe/Val dehydrogenase -
  J7445_RS07405 (J7445_07405) - 1569372..1570082 (+) 711 WP_209282876.1 phosphoglycolate phosphatase -
  J7445_RS07410 (J7445_07410) recX 1570282..1570749 (+) 468 WP_209282877.1 recombination regulator RecX Regulator
  J7445_RS07415 (J7445_07415) - 1570826..1571236 (-) 411 Protein_1437 DUF302 domain-containing protein -
  J7445_RS07420 (J7445_07420) - 1571376..1571741 (-) 366 WP_101810320.1 rhodanese-like domain-containing protein -
  J7445_RS07425 (J7445_07425) - 1571867..1572202 (-) 336 WP_045075755.1 carboxymuconolactone decarboxylase family protein -
  J7445_RS07430 (J7445_07430) - 1572360..1573304 (+) 945 WP_209282879.1 AraC family transcriptional regulator -
  J7445_RS07435 (J7445_07435) - 1573599..1575005 (-) 1407 WP_209282880.1 dihydrolipoyl dehydrogenase -

Sequence

Protein


Download         Length: 155 a.a.        Molecular weight: 17975.33 Da        Isoelectric Point: 8.0347

>NTDB_id=553914 J7445_RS07410 WP_209282877.1 1570282..1570749(+) (recX) [Neisseria sicca strain NS20201025]
MKPQKSLRARAMDILSRQEISRIGLKRKLAPYAESEEELENVLNEFAERNWQSDQRYAEAYIHSKSRQHGSLRLKQALAQ
QGIDETVSREFMPDKACELQTAVAVLRKKFKQPAADLKDKQKQARFLAYRGFDMDTIHAALKSSWDEEIFDASEE

Nucleotide


Download         Length: 468 bp        

>NTDB_id=553914 J7445_RS07410 WP_209282877.1 1570282..1570749(+) (recX) [Neisseria sicca strain NS20201025]
ATGAAACCCCAAAAATCCCTGCGCGCCCGCGCGATGGACATTCTTTCCCGACAGGAAATCAGCCGTATCGGACTCAAACG
CAAGCTCGCTCCGTATGCCGAAAGCGAAGAAGAATTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAATCCG
ACCAACGTTACGCCGAAGCCTACATCCACAGCAAAAGCCGCCAACACGGCTCGCTGCGTCTGAAACAGGCATTGGCGCAG
CAAGGCATAGACGAAACCGTCAGCCGCGAATTCATGCCCGACAAAGCGTGCGAACTGCAAACCGCTGTCGCCGTGTTGCG
CAAAAAATTCAAACAACCTGCCGCCGATTTAAAAGACAAACAAAAACAAGCGCGCTTCCTCGCCTATCGCGGATTCGACA
TGGACACCATCCACGCCGCGCTCAAAAGCAGTTGGGACGAAGAAATATTCGACGCTTCTGAAGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(35-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

80.921

98.065

0.794