Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   J7S31_RS09175 Genome accession   NZ_CP072523
Coordinates   1818965..1819741 (+) Length   258 a.a.
NCBI ID   WP_032461855.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain SHZ-1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1813965..1824741
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7S31_RS09155 (J7S31_09105) - 1815588..1816568 (-) 981 WP_162988407.1 IS30 family transposase -
  J7S31_RS09165 (J7S31_09115) rlmH 1816963..1817442 (-) 480 WP_002994924.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  J7S31_RS09170 (J7S31_09120) htrA 1817653..1818876 (+) 1224 WP_002994926.1 trypsin-like peptidase domain-containing protein Regulator
  J7S31_RS09175 (J7S31_09125) spo0J 1818965..1819741 (+) 777 WP_032461855.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29116.97 Da        Isoelectric Point: 10.3100

>NTDB_id=553888 J7S31_RS09175 WP_032461855.1 1818965..1819741(+) (spo0J) [Streptococcus pyogenes strain SHZ-1]
MTKELLIDLPIEDIITNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISA
GHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFFNDDELNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=553888 J7S31_RS09175 WP_032461855.1 1818965..1819741(+) (spo0J) [Streptococcus pyogenes strain SHZ-1]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTATTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGCAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTAGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGCACCAATCATTAAAGCAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTCATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCCA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTTCAATGATGATGAATTAAACAGAATTATCAACAAGCTAAAGTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(9-96)

HTH domain found in ParB protein (HTH_ParB)

(148-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.366

99.612

0.581