Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   J7S31_RS02190 Genome accession   NZ_CP072523
Coordinates   415266..416075 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain SHZ-1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 410266..421075
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7S31_RS02170 (J7S31_02180) - 410707..411954 (+) 1248 WP_011054268.1 AMP-binding protein -
  J7S31_RS02175 (J7S31_02185) - 412050..413045 (+) 996 WP_011054269.1 DUF3114 domain-containing protein -
  J7S31_RS02180 (J7S31_02190) vicR 413207..413917 (+) 711 WP_002985645.1 response regulator YycF Regulator
  J7S31_RS02185 (J7S31_02195) vicK 413910..415262 (+) 1353 WP_002995609.1 cell wall metabolism sensor histidine kinase VicK Regulator
  J7S31_RS02190 (J7S31_02200) vicX 415266..416075 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  J7S31_RS02195 (J7S31_02205) rnc 416518..417210 (+) 693 WP_002990670.1 ribonuclease III -
  J7S31_RS02200 (J7S31_02210) smc 417211..420738 (+) 3528 WP_011054270.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=553858 J7S31_RS02190 WP_002985641.1 415266..416075(+) (vicX) [Streptococcus pyogenes strain SHZ-1]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=553858 J7S31_RS02190 WP_002985641.1 415266..416075(+) (vicX) [Streptococcus pyogenes strain SHZ-1]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758