Detailed information NTG0553833

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: J7S31_RS00325
• Genome accession: NZ_CP072523
• Coordinates: 53242..54153 (+)
• Length: 303 a.a.
• NCBI ID: WP_011054099.1
• Uniprot ID: A0A5S4TJF2
• Organism: Streptococcus pyogenes strain SHZ-1
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 48242..59153

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7S31_RS00305 (J7S31_00310)	purE	48538..49029 (+)	492	WP_030127619.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
J7S31_RS00310 (J7S31_00315)	purK	49016..50089 (+)	1074	WP_032461293.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
J7S31_RS00315 (J7S31_00320)	-	50110..51450 (+)	1341	WP_002986685.1	hypothetical protein	-
J7S31_RS00320 (J7S31_00325)	purB	51819..53111 (+)	1293	WP_011054098.1	adenylosuccinate lyase	-
J7S31_RS00325 (J7S31_00330)	comR	53242..54153 (+)	912	WP_011054099.1	XRE family transcriptional regulator	Regulator
J7S31_RS00330 (J7S31_00335)	comS	54244..54342 (+)	99	WP_020833188.1	quorum-sensing system DWW-type pheromone	Regulator
J7S31_RS00335 (J7S31_00340)	ruvB	54373..55371 (+)	999	WP_011054100.1	Holliday junction branch migration DNA helicase RuvB	-
J7S31_RS00340 (J7S31_00345)	-	55509..55946 (+)	438	WP_002994668.1	low molecular weight phosphotyrosine protein phosphatase	-
J7S31_RS00345 (J7S31_00350)	-	55969..56370 (+)	402	WP_011017240.1	MORN repeat-containing protein	-
J7S31_RS00350 (J7S31_00355)	-	56367..58142 (+)	1776	WP_011054101.1	acyltransferase family protein	-

Sequence

Protein

• Length: 303 a.a.
• Molecular weight: 35896.55 Da
• Isoelectric Point: 4.9324

>NTDB_id=553833 J7S31_RS00325 WP_011054099.1 53242..54153(+) (comR) [Streptococcus pyogenes strain SHZ-1]
MLEHFGGKVKVLRLEKRISREDLCGDESELSVRQLARIELGQSIPSLSKVIFIAKALNVSVGYLTDGADLELPKRYKELK
YLILRTPTYMDDGKLQVREEQFDEIFEDYYDKLPEEEKVAVDIIQAKFEVYQTGDINFGYSILKEFLPQLKRKSIYNLNE
LLLIDLYLIILVVSHFSDDIFDVQFYEEITESMLKQHNNLSLEDLFLLNNILLSCADTYIRLKMFGHLKETLQLSHFIMS
TIQDFQKMPMYCMYEWKLSIFYLKDINRARNYFEQSILFTQMTGDTYLVQKLRGEWNKDIHYI

Nucleotide

• Length: 912 bp

>NTDB_id=553833 J7S31_RS00325 WP_011054099.1 53242..54153(+) (comR) [Streptococcus pyogenes strain SHZ-1]
ATGTTAGAACATTTTGGTGGAAAAGTAAAAGTGTTAAGACTTGAAAAGAGGATTAGTCGCGAGGACTTGTGTGGGGATGA
GTCTGAACTTTCTGTTCGTCAATTAGCACGGATAGAACTAGGTCAATCCATACCAAGTTTAAGTAAGGTTATTTTTATTG
CAAAAGCCTTAAACGTTAGTGTCGGTTACTTAACTGATGGTGCTGATTTAGAACTACCTAAGCGTTACAAAGAATTAAAA
TACCTTATCTTAAGGACACCAACTTACATGGATGATGGAAAATTACAAGTACGAGAAGAGCAGTTTGATGAAATTTTTGA
GGATTATTATGATAAATTACCAGAGGAAGAGAAAGTTGCTGTTGATATTATCCAAGCAAAATTTGAAGTTTATCAAACCG
GAGATATTAATTTCGGATATAGTATTTTAAAAGAATTTCTACCACAGCTAAAAAGAAAATCTATCTATAATTTAAATGAA
TTATTACTTATAGATTTGTATTTGATTATTCTGGTAGTTTCTCATTTTTCAGATGATATATTTGATGTACAGTTTTATGA
AGAAATAACAGAGAGCATGTTAAAACAACACAATAATTTATCATTGGAAGATTTATTTTTACTGAATAATATCTTATTAT
CTTGTGCGGACACTTATATTCGTTTGAAGATGTTCGGTCATCTAAAAGAAACATTACAACTTAGCCACTTTATAATGTCA
ACTATTCAAGATTTTCAAAAAATGCCTATGTATTGTATGTATGAATGGAAGCTATCTATTTTTTATTTGAAAGATATTAA
CCGAGCACGGAATTACTTTGAACAGTCTATTTTATTTACTCAAATGACAGGAGATACATATTTAGTTCAAAAATTACGGG
GAGAATGGAATAAAGATATTCATTATATTTAA

Domains

Predicted by InterproScan.

• ComR tetratricopeptide (ComR_TPR) (73-296)

• Helix-turn-helix (HTH_3) (12-64)

3D structure

• AlphaFold DB: A0A5S4TJF2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus pyogenes MGAS315	100	100	1
comR	Streptococcus pyogenes MGAS8232	58.472	99.34	0.581
comR	Streptococcus mutans UA159	47.157	98.68	0.465
comR	Streptococcus infantarius subsp. infantarius ATCC BAA-102	46.441	97.36	0.452
comR	Streptococcus suis P1/7	37.374	98.02	0.366
comR	Streptococcus suis 05ZYH33	37.374	98.02	0.366