Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   J7V84_RS07755 Genome accession   NZ_CP072494
Coordinates   1621564..1622160 (+) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain KPN246     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1616564..1627160
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7V84_RS07735 (J7V84_07735) - 1616756..1618513 (-) 1758 WP_004147851.1 AAA family ATPase -
  J7V84_RS07740 (J7V84_07740) matP 1618699..1619151 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  J7V84_RS07745 (J7V84_07745) ompA 1619283..1620353 (-) 1071 WP_002898408.1 porin OmpA -
  J7V84_RS07750 (J7V84_07750) sulA 1620706..1621215 (-) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  J7V84_RS07755 (J7V84_07755) sxy/tfoX 1621564..1622160 (+) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  J7V84_RS07760 (J7V84_07760) yccS 1622174..1624309 (-) 2136 WP_002898422.1 YccS family putative transporter -
  J7V84_RS07765 (J7V84_07765) - 1624327..1624773 (-) 447 WP_004224032.1 YccF domain-containing protein -
  J7V84_RS07770 (J7V84_07770) helD 1624898..1626952 (+) 2055 WP_004179218.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=553724 J7V84_RS07755 WP_004179217.1 1621564..1622160(+) (sxy/tfoX) [Klebsiella pneumoniae strain KPN246]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=553724 J7V84_RS07755 WP_004179217.1 1621564..1622160(+) (sxy/tfoX) [Klebsiella pneumoniae strain KPN246]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51