Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   J5Z55_RS22690 Genome accession   NZ_CP072473
Coordinates   4387470..4389197 (-) Length   575 a.a.
NCBI ID   WP_195781877.1    Uniprot ID   -
Organism   Priestia aryabhattai strain LAD     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4382470..4394197
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5Z55_RS22670 (J5Z55_22670) - 4382802..4382954 (+) 153 WP_064504589.1 YycC family protein -
  J5Z55_RS22675 (J5Z55_22675) - 4383268..4384599 (+) 1332 WP_164796481.1 peptide MFS transporter -
  J5Z55_RS22680 (J5Z55_22680) spo0A 4384991..4385779 (-) 789 WP_013084985.1 sporulation transcription factor Spo0A -
  J5Z55_RS22685 (J5Z55_22685) spoIVB 4386007..4387287 (-) 1281 WP_195781878.1 SpoIVB peptidase -
  J5Z55_RS22690 (J5Z55_22690) recN 4387470..4389197 (-) 1728 WP_195781877.1 DNA repair protein RecN Machinery gene
  J5Z55_RS22695 (J5Z55_22695) argR 4389214..4389663 (-) 450 WP_013059136.1 transcriptional regulator ArgR -
  J5Z55_RS22700 (J5Z55_22700) - 4389825..4390652 (-) 828 WP_057233494.1 TlyA family RNA methyltransferase -
  J5Z55_RS22705 (J5Z55_22705) dxs 4390649..4392550 (-) 1902 WP_209150654.1 1-deoxy-D-xylulose-5-phosphate synthase -
  J5Z55_RS22710 (J5Z55_22710) - 4392871..4393767 (-) 897 WP_209150655.1 polyprenyl synthetase family protein -
  J5Z55_RS22715 (J5Z55_22715) - 4393767..4394000 (-) 234 WP_013059140.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 575 a.a.        Molecular weight: 64678.21 Da        Isoelectric Point: 4.8290

>NTDB_id=553671 J5Z55_RS22690 WP_195781877.1 4387470..4389197(-) (recN) [Priestia aryabhattai strain LAD]
MLAELSIKNFAIIDELSVSFEKGLTVLTGETGAGKSIIIDAISLLVGGRGSSEFVRHGTDRAEIEGLFLFDEEQHPSHEK
AKQVGLEVEDGMIVLRRDITTNGKSICRINGKLVTLAILREVGQTLIDIHGQHEHQDLMNQDRHLTLLDQYGGEKVEEAL
TEYREVFSRYTSLKKQLDQLTENEQQMAHRLDLIQFQLDEIKAANLQLNEDEELNEERLKISNFEKIYTSLNDAYNALHG
EHQGLDWVGVAMNHTEDISSLEKNYADISEIISSSFYQLEDASYKIRQQLDLLEFDPKRLDFIEARLNEINHLKRKYGQS
VDEILEYAAQIEDEIDRIENRDTHVSKIKEQLNSVAQDLLVEANNVSAIRKKLAQELTDSIHHELQELYMAKTVFQIKFS
VVNAGKNDVEVNGERIKFTKDGIDNVEFYISTNPGEPLKPLAKVASGGELSRIMLALKSIFSKHQGVTSIIFDEVDTGVS
GRVAQSIGEKIHAISVDSQVLCISHLPQVAAMADTHLFIAKEIKGDRTTTSVLPLTLDEKVKEIGRMIAGAEITSLTKEH
AKELLDLADKMKHTI

Nucleotide


Download         Length: 1728 bp        

>NTDB_id=553671 J5Z55_RS22690 WP_195781877.1 4387470..4389197(-) (recN) [Priestia aryabhattai strain LAD]
TTGTTAGCTGAATTATCCATTAAAAATTTTGCGATTATTGATGAACTTTCTGTTTCATTTGAAAAAGGCTTAACGGTATT
AACAGGCGAAACAGGAGCGGGAAAGTCAATTATTATTGATGCCATTTCATTGTTAGTAGGTGGAAGAGGCTCTTCAGAGT
TTGTCCGCCACGGAACAGACAGAGCCGAAATTGAAGGGCTTTTCTTATTTGATGAAGAACAGCATCCGAGTCACGAAAAA
GCTAAACAAGTCGGTTTAGAAGTGGAAGATGGAATGATTGTGCTTCGCCGAGACATTACGACAAATGGGAAAAGTATTTG
CCGGATCAACGGTAAGCTCGTAACGTTAGCTATCCTACGTGAAGTTGGACAGACGTTAATTGATATACATGGACAGCATG
AACACCAAGATTTAATGAATCAAGATCGTCACTTAACTCTTCTTGATCAATATGGAGGAGAAAAAGTAGAAGAGGCTTTA
ACGGAGTATCGAGAGGTATTTTCTAGGTATACATCGTTAAAAAAACAGTTAGATCAATTAACTGAAAATGAACAGCAGAT
GGCACATCGCCTAGATCTTATTCAATTTCAATTAGATGAAATTAAAGCGGCAAATTTGCAGCTGAACGAAGACGAGGAAC
TAAATGAAGAGCGTTTGAAGATTTCTAACTTTGAAAAGATCTATACTTCACTAAACGATGCGTACAATGCGCTGCACGGT
GAACATCAAGGTTTAGATTGGGTAGGCGTAGCAATGAATCATACGGAGGATATTTCTTCACTGGAAAAAAACTATGCCGA
TATTTCTGAAATCATTTCATCGAGTTTCTATCAGCTAGAAGACGCGTCTTATAAAATTCGTCAGCAGCTTGATTTATTAG
AATTTGATCCCAAACGCTTAGACTTTATTGAAGCGCGTTTAAATGAAATTAATCACTTAAAGCGTAAATACGGTCAAAGT
GTAGACGAAATTCTAGAATATGCAGCACAAATTGAAGATGAAATTGATCGTATTGAAAATCGAGATACGCATGTGAGTAA
GATCAAAGAGCAGTTAAACAGCGTAGCGCAGGATTTATTAGTAGAAGCTAACAATGTTTCAGCTATTCGAAAAAAACTTG
CTCAAGAGTTAACGGACAGCATCCATCATGAGCTTCAAGAACTGTATATGGCTAAGACCGTATTTCAAATTAAATTCTCT
GTTGTAAATGCAGGTAAAAATGACGTTGAAGTAAATGGAGAAAGAATAAAATTCACCAAAGACGGCATTGACAACGTAGA
GTTTTATATTTCTACCAACCCTGGTGAACCGTTAAAGCCTCTTGCAAAAGTAGCATCAGGAGGAGAACTGTCAAGAATTA
TGCTGGCGTTAAAGAGCATCTTCTCTAAGCATCAAGGTGTGACGTCCATTATCTTTGATGAAGTTGATACAGGCGTAAGT
GGAAGAGTAGCTCAATCGATCGGTGAAAAAATACATGCCATTTCCGTTGATTCACAAGTTCTCTGTATATCTCATCTGCC
GCAGGTAGCAGCTATGGCAGATACTCATCTCTTTATTGCTAAAGAGATAAAAGGTGATCGTACAACGACGTCTGTTCTTC
CATTAACTCTTGATGAAAAAGTAAAAGAAATTGGTCGAATGATTGCAGGAGCTGAAATTACAAGCTTAACGAAGGAACAT
GCCAAAGAGCTTTTAGATTTAGCGGATAAGATGAAGCACACCATTTAA

Domains

Predicted by InterproScan.

AAA domain (AAA_23)

(4-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

64.931

100

0.65