Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   J5Z55_RS16865 Genome accession   NZ_CP072473
Coordinates   3304260..3305210 (-) Length   316 a.a.
NCBI ID   WP_209150115.1    Uniprot ID   -
Organism   Priestia aryabhattai strain LAD     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3299260..3310210
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5Z55_RS16845 (J5Z55_16845) - 3300145..3300987 (-) 843 WP_016764829.1 manganese catalase family protein -
  J5Z55_RS31620 - 3301336..3301458 (-) 123 WP_268241093.1 hypothetical protein -
  J5Z55_RS16850 (J5Z55_16850) - 3301588..3302544 (-) 957 WP_116071123.1 siderophore ABC transporter substrate-binding protein -
  J5Z55_RS16855 (J5Z55_16855) - 3302568..3303326 (-) 759 WP_013057889.1 ABC transporter ATP-binding protein -
  J5Z55_RS16860 (J5Z55_16860) - 3303320..3304267 (-) 948 WP_195782648.1 iron chelate uptake ABC transporter family permease subunit -
  J5Z55_RS16865 (J5Z55_16865) ceuB 3304260..3305210 (-) 951 WP_209150115.1 ABC transporter permease Machinery gene
  J5Z55_RS16870 (J5Z55_16870) - 3305817..3306623 (-) 807 WP_195782647.1 cell wall hydrolase -
  J5Z55_RS16875 (J5Z55_16875) - 3306986..3307240 (+) 255 WP_013057893.1 hypothetical protein -
  J5Z55_RS16880 (J5Z55_16880) - 3307322..3307486 (-) 165 WP_209150116.1 hypothetical protein -
  J5Z55_RS16885 (J5Z55_16885) - 3307812..3308375 (-) 564 WP_209150117.1 NAD(P)H-dependent oxidoreductase -
  J5Z55_RS16890 (J5Z55_16890) lepB 3308665..3309225 (-) 561 WP_028414470.1 signal peptidase I -
  J5Z55_RS16895 (J5Z55_16895) - 3309312..3309665 (-) 354 WP_195782645.1 DUF4440 domain-containing protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34963.18 Da        Isoelectric Point: 9.9188

>NTDB_id=553661 J5Z55_RS16865 WP_209150115.1 3304260..3305210(-) (ceuB) [Priestia aryabhattai strain LAD]
MKFYQLILVFAVLAVSSLFIGVQDLSAVDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTALLGAVFVLACDILGRIIIFPYEISIGLMVGVIGSAIFLFMLVRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=553661 J5Z55_RS16865 WP_209150115.1 3304260..3305210(-) (ceuB) [Priestia aryabhattai strain LAD]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTAGCAGTTTCATCTCTTTTTATAGGAGTACAAGATTTGTCAGC
AGTAGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTCAGTCGGTTTCCAAGGCTTTTGAGCATTATTA
TGGCGGGAATGAGCCTTAGCATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTATCTCCAACGACTGCA
GGAACGATGGACTGGGCAAGACTTGGTGTATTAATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTTGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTCGGTTTAATGCTCGGTAGTATCGTAAGTTCCTTAGCTACCTTCATCGCCTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGGAGATATGAACTTTTATACCTGAGTATACC
CCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATATAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTTCCTTTTTTAGGATTGATTATTCCAAATATCGTATCAATTTACCGTGGAGATCATTTACGAAAAAGTCTGCCTCATAC
AGCGCTGCTTGGAGCTGTGTTCGTACTTGCGTGTGATATTTTAGGAAGAATCATTATTTTTCCTTATGAAATTTCCATTG
GGTTAATGGTCGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGGTAAGGAGAGGTCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53

94.937

0.503