Detailed information NTG0553495

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LXF06_RS05520
• Genome accession: NZ_CP090305
• Coordinates: 1167416..1168399 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain Z503
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1162416..1173399

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LXF06_RS05505	dppA	1163559..1165166 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
LXF06_RS22670	-	1165200..1165310 (-)	111	Protein_1062	hypothetical protein	-
LXF06_RS05510	dppB	1165474..1166493 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LXF06_RS05515	dppC	1166503..1167405 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
LXF06_RS05520	amiE	1167416..1168399 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
LXF06_RS05525	dppF	1168396..1169400 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
LXF06_RS05530	yhjV	1169430..1170701 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
LXF06_RS05535	ldrD	1171177..1171284 (+)	108	WP_000141633.1	type I toxin-antitoxin system toxin Ldr family protein	-
LXF06_RS05540	bcsG	1171371..1173050 (-)	1680	WP_001753180.1	cellulose biosynthesis protein BcsG	-
LXF06_RS05545	bcsF	1173047..1173238 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=553495 LXF06_RS05520 WP_001196486.1 1167416..1168399(+) (amiE) [Escherichia coli strain Z503]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=553495 LXF06_RS05520 WP_001196486.1 1167416..1168399(+) (amiE) [Escherichia coli strain Z503]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404