Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   J7U05_RS05245 Genome accession   NZ_CP072443
Coordinates   1001683..1002495 (-) Length   270 a.a.
NCBI ID   WP_116920393.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24724     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 996683..1007495
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7U05_RS05220 (J7U05_05215) - 997620..998006 (-) 387 WP_002953113.1 DUF1934 domain-containing protein -
  J7U05_RS05225 (J7U05_05220) - 998098..998977 (-) 880 Protein_973 GNAT family N-acetyltransferase -
  J7U05_RS05230 (J7U05_05225) yidA 999185..999994 (+) 810 WP_011226081.1 sugar-phosphatase -
  J7U05_RS05235 (J7U05_05230) - 999996..1001210 (+) 1215 WP_002953123.1 aminoacyltransferase -
  J7U05_RS05240 (J7U05_05235) - 1001262..1001623 (-) 362 Protein_976 YbaN family protein -
  J7U05_RS05245 (J7U05_05240) vicX 1001683..1002495 (-) 813 WP_116920393.1 MBL fold metallo-hydrolase Regulator
  J7U05_RS05250 (J7U05_05245) vicK 1002501..1003841 (-) 1341 WP_084828862.1 cell wall metabolism sensor histidine kinase VicK Regulator
  J7U05_RS05255 (J7U05_05250) vicR 1003834..1004541 (-) 708 WP_011681206.1 response regulator YycF Regulator
  J7U05_RS05260 (J7U05_05255) - 1005068..1005835 (+) 768 WP_011681207.1 amino acid ABC transporter ATP-binding protein -
  J7U05_RS05265 (J7U05_05260) - 1005847..1006680 (+) 834 WP_116920255.1 transporter substrate-binding domain-containing protein -
  J7U05_RS05270 (J7U05_05265) - 1006698..1007396 (+) 699 WP_014608374.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30073.02 Da        Isoelectric Point: 5.5779

>NTDB_id=553394 J7U05_RS05245 WP_116920393.1 1001683..1002495(-) (vicX) [Streptococcus thermophilus strain S24724]
MTSELGFRYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKVDNSQKHIFSRGKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GLIENADGYLIESNHDIEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAYMTME
NQLARADFGVGTDFKIFGTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=553394 J7U05_RS05245 WP_116920393.1 1001683..1002495(-) (vicX) [Streptococcus thermophilus strain S24724]
ATGACCTCAGAATTAGGGTTTAGATATAGTATTTTGGCTTCAGGGTCAACCGGGAATTCCTTTTATTTGGAAACTCCAGA
AAAGAAGATTCTAGTGGATGCTGGTTTATCAGGAAAAAAAATTACAAGTTTGCTAGCGGAGATTGACCGTGATCCAAGTG
ATCTTGATGCTATCTTAGTAACACATGAACACAAGGACCATATCCATGGTGTAGGTGTTTTAGCTCGTAAATACGGCATG
GATATATACGCCAATGAGAAAACCTGGCAAATTATGGATAGTAAGAATATGCTAGGTAAGGTTGATAATAGTCAGAAACA
TATTTTTTCTCGCGGTAAGCTTCTAACCTTTGGTGATATCGACATTGAATCTTTCGGAGTTAGTCATGATGCCATTGATC
CACAATTTTACCGCTTTATGAAAGACGGAAAGAGCTTTGTCATGTTGACGGATACAGGCTATGTTTCAGACCGTATGGCT
GGTCTTATTGAAAATGCTGATGGCTATCTGATTGAATCTAATCATGATATTGAAATCTTGAGAGCTGGTTCTTATCCTTG
GTCAACCAAGCAACGTATCCTCTCTGATCAGGGTCACTTGTGTAATGAGGATGGAGCCGATGCTATGATTCGTACCATCG
GTAATAAAACTAAAAAGATTTATCTGGGTCACCTTTCCAAAGAAAATAATATCAAGGAATTGGCCTACATGACGATGGAA
AATCAGTTGGCTCGCGCTGACTTTGGTGTTGGAACTGACTTTAAGATTTTTGGTACCTCACCAGATACGGCGACCCCACT
AACAGATATTTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

78.358

99.259

0.778