Detailed information NTG0553392

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LVJ26_RS00895
• Genome accession: NZ_CP090212
• Coordinates: 192405..193388 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain BY68
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 187405..198388

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LVJ26_RS00875 (LVJ26_00875)	dppA	188548..190155 (+)	1608	WP_032187380.1	dipeptide ABC transporter substrate-binding protein DppA	-
LVJ26_RS00880	-	190189..190299 (-)	111	Protein_173	hypothetical protein	-
LVJ26_RS00885 (LVJ26_00885)	dppB	190463..191482 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LVJ26_RS00890 (LVJ26_00890)	dppC	191492..192394 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
LVJ26_RS00895 (LVJ26_00895)	amiE	192405..193388 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
LVJ26_RS00900 (LVJ26_00900)	dppF	193385..194389 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
LVJ26_RS00905 (LVJ26_00905)	yhjV	194419..195690 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
LVJ26_RS00910 (LVJ26_00910)	ldrD	196166..196273 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
LVJ26_RS00915 (LVJ26_00915)	bcsG	196360..198039 (-)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
LVJ26_RS00920 (LVJ26_00920)	bcsF	198036..198227 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=553392 LVJ26_RS00895 WP_001196486.1 192405..193388(+) (amiE) [Escherichia coli strain BY68]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=553392 LVJ26_RS00895 WP_001196486.1 192405..193388(+) (amiE) [Escherichia coli strain BY68]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404