Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   J7U05_RS03610 Genome accession   NZ_CP072443
Coordinates   679081..679374 (+) Length   97 a.a.
NCBI ID   WP_014621407.1    Uniprot ID   A0AAU9H9S0
Organism   Streptococcus thermophilus strain S24724     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 674081..684374
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7U05_RS03590 (J7U05_03590) - 674409..675404 (+) 996 WP_046206426.1 SIR2 family protein -
  J7U05_RS03595 (J7U05_03595) - 675410..677266 (+) 1857 WP_116920185.1 ATP-binding protein -
  J7U05_RS03600 (J7U05_03600) - 677375..678559 (+) 1185 WP_224103284.1 restriction endonuclease subunit S -
  J7U05_RS03605 (J7U05_03605) - 678773..679091 (+) 319 Protein_649 type II toxin-antitoxin system RelE/ParE family toxin -
  J7U05_RS03610 (J7U05_03610) HI0659 679081..679374 (+) 294 WP_014621407.1 helix-turn-helix domain-containing protein Machinery gene
  J7U05_RS03615 (J7U05_03615) - 679396..680997 (+) 1602 WP_014621408.1 type I restriction-modification system subunit M -
  J7U05_RS03620 (J7U05_03620) - 681105..681494 (+) 390 Protein_652 PD-(D/E)XK nuclease family transposase -
  J7U05_RS03625 (J7U05_03625) - 681592..682592 (+) 1001 Protein_653 DNA/RNA non-specific endonuclease -
  J7U05_RS03630 (J7U05_03630) - 682743..683303 (+) 561 WP_011225762.1 LemA family protein -
  J7U05_RS03635 (J7U05_03635) htpX 683305..684204 (+) 900 WP_011227064.1 zinc metalloprotease HtpX -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10744.50 Da        Isoelectric Point: 5.8962

>NTDB_id=553391 J7U05_RS03610 WP_014621407.1 679081..679374(+) (HI0659) [Streptococcus thermophilus strain S24724]
MKNSAIGSNWKDVRAELFTKEEILESDLRVAIMTELIEARHEKGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPLEQEKI

Nucleotide


Download         Length: 294 bp        

>NTDB_id=553391 J7U05_RS03610 WP_014621407.1 679081..679374(+) (HI0659) [Streptococcus thermophilus strain S24724]
ATGAAGAATAGTGCCATCGGCAGCAATTGGAAAGATGTGAGAGCAGAGCTCTTCACCAAGGAAGAAATCCTGGAAAGTGA
TTTACGGGTCGCGATTATGACTGAGCTGATCGAGGCTCGACACGAAAAGGGCATTAGCCAAAAGAAACTAGAAGAACTCA
GTGGGGTCAGTCAACCGGTCATCGCTCGGATGGAGACAGGAAAGACCAGTCCTCAATTGGACACGGTTTTGAAAGTCTTA
GCCAGTCTGGGCAAGACCCTCGCTGTCGTCCCACTGGAACAAGAAAAGATCTAA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

60.44

93.814

0.567