Detailed information
Bioinformatically predicted
Overview
| Name | rcrR | Type | Regulator |
| Locus tag | J7T81_RS02325 | Genome accession | NZ_CP072439 |
| Coordinates | 426974..427417 (+) | Length | 147 a.a. |
| NCBI ID | WP_002945408.1 | Uniprot ID | - |
| Organism | Streptococcus thermophilus strain S24732 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 420132..442284 | 426974..427417 | within | 0 |
Gene organization within MGE regions
Location: 420132..442284
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J7T81_RS02300 (J7T81_02300) | - | 420132..421340 (+) | 1209 | WP_004197277.1 | CCA tRNA nucleotidyltransferase | - |
| J7T81_RS02305 (J7T81_02305) | - | 421418..423298 (+) | 1881 | WP_138496667.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| J7T81_RS02310 (J7T81_02315) | - | 423380..424420 (-) | 1041 | WP_339328283.1 | AAA family ATPase | - |
| J7T81_RS02315 (J7T81_02320) | gdhA | 424764..426116 (+) | 1353 | WP_011680803.1 | NADP-specific glutamate dehydrogenase | - |
| J7T81_RS02320 (J7T81_02325) | - | 426374..426784 (+) | 411 | WP_011680804.1 | peptide deformylase | - |
| J7T81_RS02325 (J7T81_02330) | rcrR | 426974..427417 (+) | 444 | WP_002945408.1 | MarR family winged helix-turn-helix transcriptional regulator | Regulator |
| J7T81_RS02330 (J7T81_02335) | rcrP | 427421..429235 (+) | 1815 | WP_138496668.1 | ABC transporter ATP-binding protein | Regulator |
| J7T81_RS02335 (J7T81_02340) | rcrQ | 429225..431003 (+) | 1779 | WP_011225561.1 | ABC transporter ATP-binding protein | Regulator |
| J7T81_RS02340 (J7T81_02345) | - | 431159..431530 (+) | 372 | WP_232981380.1 | GNAT family acetyltransferase | - |
| J7T81_RS02345 (J7T81_02350) | - | 431553..432715 (+) | 1163 | Protein_401 | sensor histidine kinase | - |
| J7T81_RS02350 (J7T81_02355) | pyrH | 432951..433688 (+) | 738 | WP_002949867.1 | UMP kinase | - |
| J7T81_RS02355 (J7T81_02360) | frr | 433703..434260 (+) | 558 | WP_002949868.1 | ribosome recycling factor | - |
| J7T81_RS02360 (J7T81_02365) | cvfB | 434351..435208 (+) | 858 | WP_014608029.1 | RNA-binding virulence regulatory protein CvfB | - |
| J7T81_RS02365 (J7T81_02370) | - | 435217..435432 (+) | 216 | WP_002944188.1 | YozE family protein | - |
| J7T81_RS02370 (J7T81_02375) | - | 435673..436971 (+) | 1299 | WP_138496669.1 | LysM domain-containing protein | - |
| J7T81_RS02375 (J7T81_02380) | - | 437051..438112 (+) | 1062 | WP_138496670.1 | PhoH family protein | - |
| J7T81_RS02380 (J7T81_02385) | - | 438391..438549 (+) | 159 | WP_011680811.1 | hypothetical protein | - |
| J7T81_RS02385 (J7T81_02390) | - | 439321..439734 (+) | 414 | WP_014608035.1 | hypothetical protein | - |
| J7T81_RS02390 (J7T81_02395) | - | 440184..440420 (+) | 237 | WP_014608037.1 | hypothetical protein | - |
| J7T81_RS02395 (J7T81_02400) | - | 440417..440824 (+) | 408 | WP_002948125.1 | hypothetical protein | - |
| J7T81_RS02400 (J7T81_02405) | - | 440956..442212 (-) | 1257 | WP_011681055.1 | ISL3-like element ISSth1 family transposase | - |
Sequence
Protein
Download Length: 147 a.a. Molecular weight: 17031.41 Da Isoelectric Point: 9.5790
>NTDB_id=553150 J7T81_RS02325 WP_002945408.1 426974..427417(+) (rcrR) [Streptococcus thermophilus strain S24732]
MHGKDPFSDFREFINTMESRVQELGKAYGVEHLAGPQGFAVRYLFENQDKEIFIKDIEKKLSISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGKKKAQDVGHFREAIHGQLLDGISKEDAETAFRVFHQIRKNLEKNKE
MHGKDPFSDFREFINTMESRVQELGKAYGVEHLAGPQGFAVRYLFENQDKEIFIKDIEKKLSISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGKKKAQDVGHFREAIHGQLLDGISKEDAETAFRVFHQIRKNLEKNKE
Nucleotide
Download Length: 444 bp
>NTDB_id=553150 J7T81_RS02325 WP_002945408.1 426974..427417(+) (rcrR) [Streptococcus thermophilus strain S24732]
ATGCATGGAAAAGATCCTTTTAGTGACTTCAGAGAATTCATCAATACTATGGAGTCTCGCGTGCAAGAGTTAGGTAAAGC
GTATGGCGTTGAGCATTTAGCTGGTCCACAAGGGTTTGCCGTTAGGTACTTGTTTGAGAACCAAGATAAAGAAATATTTA
TCAAAGATATTGAGAAAAAACTATCTATTTCCAAGTCAGTGGCTAGTAATTTGGTCAAACGTATGGAGAAAAATGGTTTT
GTTGAATTGGTGACATCTGACAAGGACAAACGCTACAAGTATGTTCATCTGACAGACTTAGGCAAAAAGAAGGCTCAAGA
CGTCGGACATTTCCGAGAGGCTATCCATGGACAGTTATTAGATGGTATTTCGAAAGAAGATGCTGAAACAGCATTTCGAG
TCTTTCACCAAATTCGTAAGAATTTAGAGAAAAATAAGGAGTAA
ATGCATGGAAAAGATCCTTTTAGTGACTTCAGAGAATTCATCAATACTATGGAGTCTCGCGTGCAAGAGTTAGGTAAAGC
GTATGGCGTTGAGCATTTAGCTGGTCCACAAGGGTTTGCCGTTAGGTACTTGTTTGAGAACCAAGATAAAGAAATATTTA
TCAAAGATATTGAGAAAAAACTATCTATTTCCAAGTCAGTGGCTAGTAATTTGGTCAAACGTATGGAGAAAAATGGTTTT
GTTGAATTGGTGACATCTGACAAGGACAAACGCTACAAGTATGTTCATCTGACAGACTTAGGCAAAAAGAAGGCTCAAGA
CGTCGGACATTTCCGAGAGGCTATCCATGGACAGTTATTAGATGGTATTTCGAAAGAAGATGCTGAAACAGCATTTCGAG
TCTTTCACCAAATTCGTAAGAATTTAGAGAAAAATAAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrR | Streptococcus mutans UA159 |
56.028 |
95.918 |
0.537 |