Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   LV497_RS09515 Genome accession   NZ_CP090007
Coordinates   2058083..2058565 (+) Length   160 a.a.
NCBI ID   WP_195187675.1    Uniprot ID   -
Organism   Streptococcus salivarius strain SALI-10     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2053083..2063565
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LV497_RS09495 (LV497_09495) queG 2053956..2055074 (+) 1119 WP_084914603.1 tRNA epoxyqueuosine(34) reductase QueG -
  LV497_RS09500 (LV497_09500) prfB 2055127..2056225 (+) 1099 WP_096833329.1 peptide chain release factor 2 -
  LV497_RS09505 (LV497_09505) ftsE 2056313..2057005 (+) 693 WP_002885005.1 cell division ATP-binding protein FtsE -
  LV497_RS09510 (LV497_09510) ftsX 2056998..2057927 (+) 930 WP_003092823.1 permease-like cell division protein FtsX -
  LV497_RS09515 (LV497_09515) mutX 2058083..2058565 (+) 483 WP_195187675.1 8-oxo-dGTP diphosphatase Machinery gene
  LV497_RS09520 (LV497_09520) - 2058575..2059753 (+) 1179 WP_014634422.1 AI-2E family transporter -
  LV497_RS09525 (LV497_09525) - 2059743..2060972 (+) 1230 WP_245084715.1 tetratricopeptide repeat protein -
  LV497_RS09530 (LV497_09530) lepB 2061094..2061651 (+) 558 WP_002884860.1 signal peptidase I -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18740.10 Da        Isoelectric Point: 4.3787

>NTDB_id=553079 LV497_RS09515 WP_195187675.1 2058083..2058565(+) (mutX) [Streptococcus salivarius strain SALI-10]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREILEETHFTVTEMDFKGMITFPEFTPGH
DWYTYVFKVTGFEGELISDEESREGTLEWVPYDEVLSKPTWEGDYEIFKWILEDKPFFSAKFVYDCNQNLVDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=553079 LV497_RS09515 WP_195187675.1 2058083..2058565(+) (mutX) [Streptococcus salivarius strain SALI-10]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGAAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTTGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTCTCGAGGAAACCCATTTTACAGTGACTGAGATGGATTTTAAAGGGATGATTACCTTTCCAGAATTTACCCCCGGTCAT
GATTGGTATACCTATGTCTTTAAGGTAACTGGTTTTGAAGGAGAACTCATCTCAGATGAGGAGTCTCGTGAAGGAACGCT
TGAATGGGTACCTTATGATGAGGTCTTATCTAAACCAACTTGGGAAGGTGACTACGAGATCTTCAAGTGGATTCTTGAAG
ATAAGCCTTTCTTCTCTGCAAAATTTGTCTATGATTGTAACCAAAACTTAGTAGACAAGACTGTAACCTTTTATGATAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

72.956

99.375

0.725