Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   LV497_RS07340 Genome accession   NZ_CP090007
Coordinates   1594268..1595074 (+) Length   268 a.a.
NCBI ID   WP_245084396.1    Uniprot ID   -
Organism   Streptococcus salivarius strain SALI-10     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1589268..1600074
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LV497_RS07315 (LV497_07315) tpiA 1589410..1590168 (+) 759 WP_002885895.1 triose-phosphate isomerase -
  LV497_RS07320 (LV497_07320) recP/tkt 1590470..1592455 (+) 1986 WP_002885962.1 transketolase Machinery gene
  LV497_RS07330 (LV497_07330) tmk 1592758..1593387 (+) 630 WP_245084392.1 dTMP kinase -
  LV497_RS07335 (LV497_07335) - 1593396..1594271 (+) 876 WP_245084394.1 DNA polymerase III subunit delta' -
  LV497_RS07340 (LV497_07340) yaaT 1594268..1595074 (+) 807 WP_245084396.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  LV497_RS07345 (LV497_07345) yabA 1595061..1595381 (+) 321 WP_002887582.1 DNA replication initiation control protein YabA -
  LV497_RS07350 (LV497_07350) rsmI 1595384..1596250 (+) 867 WP_245084398.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  LV497_RS07355 (LV497_07355) - 1596385..1597620 (+) 1236 WP_245084400.1 ammonium transporter -
  LV497_RS07360 (LV497_07360) - 1597631..1597972 (+) 342 WP_002886165.1 P-II family nitrogen regulator -
  LV497_RS07365 (LV497_07365) - 1598063..1598719 (+) 657 WP_038675485.1 glucosaminidase domain-containing protein -
  LV497_RS07370 (LV497_07370) - 1598737..1599558 (+) 822 WP_002885966.1 Cof-type HAD-IIB family hydrolase -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29812.12 Da        Isoelectric Point: 4.6410

>NTDB_id=553060 LV497_RS07340 WP_245084396.1 1594268..1595074(+) (yaaT) [Streptococcus salivarius strain SALI-10]
MTEVIGIKFEETGTIEYVVPDRNYAKDDFVVVLDKKDKRLAQVVVENTNFPEVSLPTDLNRVEGLAGERDFARYDENLLK
AEKSISVVADLITQNQLDMKVVDIVFPLDSSYVLISFVAEKRVDFRQLLKDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGDEIETKDGTGQVVAIDVI
AGTIKVVFEKGRAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=553060 LV497_RS07340 WP_245084396.1 1594268..1595074(+) (yaaT) [Streptococcus salivarius strain SALI-10]
ATGACTGAAGTCATTGGAATAAAATTTGAAGAAACTGGTACAATAGAATATGTTGTACCTGATAGAAATTATGCCAAAGA
TGACTTTGTAGTCGTTTTGGATAAAAAGGATAAGCGTCTGGCTCAGGTCGTTGTGGAGAATACAAATTTTCCTGAAGTTA
GTTTGCCTACTGATTTGAACCGAGTTGAAGGCCTAGCCGGAGAGAGGGATTTTGCCAGATATGATGAAAATCTTTTGAAG
GCTGAAAAGAGTATATCTGTGGTGGCTGATTTAATCACTCAAAATCAACTAGATATGAAAGTGGTTGACATCGTTTTTCC
TCTAGATAGCTCTTATGTACTGATTAGTTTTGTGGCTGAAAAGAGAGTCGATTTTCGTCAGTTGCTCAAGGATTTGGCAG
CTTACTTTAAGACACGCATTGAGTTGCGTCAAATTTCAAGTCGTGAGGAATCAAAAATCTATGGTGGCTTAGGACCTTGT
GGCCGGGCACTTTGTTGTTCTAGTTTTTTGGGTGAATTCCCACCAGTATCGATTAAGATGGCTAAAAATCAGAGTTTATC
TTTGAATTCTGGTAAGATGAATGGGGTCTGTGGTCGACTTATGTGTTGTCTCAGTTATGAAGATGACTTTTACCGAGATA
GCAAGGCTAGTTATCCTGATTTGGGTGATGAAATTGAAACCAAGGATGGCACGGGTCAGGTCGTTGCTATTGATGTGATT
GCAGGGACCATTAAGGTTGTATTTGAAAAAGGGCGTGCGCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.697

99.627

0.425