Detailed information NTG0553048

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: J7U26_RS05240
• Genome accession: NZ_CP072437
• Coordinates: 1008098..1008979 (-)
• Length: 293 a.a.
• NCBI ID: WP_116920256.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain S24734
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1003098..1013979

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7U26_RS05215 (J7U26_05215)	vicR	1003803..1004510 (-)	708	WP_011681206.1	response regulator YycF	Regulator
J7U26_RS05220 (J7U26_05220)	-	1005037..1005804 (+)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
J7U26_RS05225 (J7U26_05225)	-	1005816..1006649 (+)	834	WP_116920255.1	transporter substrate-binding domain-containing protein	-
J7U26_RS05230 (J7U26_05230)	-	1006667..1007365 (+)	699	WP_014608374.1	amino acid ABC transporter permease	-
J7U26_RS05235 (J7U26_05235)	-	1007377..1008027 (+)	651	WP_014608375.1	amino acid ABC transporter permease	-
J7U26_RS05240 (J7U26_05240)	endA	1008098..1008979 (-)	882	WP_116920256.1	DNA/RNA non-specific endonuclease	Machinery gene
J7U26_RS05245 (J7U26_05245)	-	1009041..1009229 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
J7U26_RS05250 (J7U26_05250)	murA	1009231..1010502 (-)	1272	WP_116920257.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
J7U26_RS05255 (J7U26_05255)	-	1010572..1010808 (-)	237	WP_002946959.1	DUF1146 family protein	-
J7U26_RS05260 (J7U26_05260)	galE	1010996..1012009 (-)	1014	WP_116920258.1	UDP-glucose 4-epimerase GalE	-
J7U26_RS05265 (J7U26_05265)	-	1012024..1012479 (-)	456	WP_240320552.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31817.55 Da
• Isoelectric Point: 10.1789

>NTDB_id=553048 J7U26_RS05240 WP_116920256.1 1008098..1008979(-) (endA) [Streptococcus thermophilus strain S24734]
MVKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLSETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=553048 J7U26_RS05240 WP_116920256.1 1008098..1008979(-) (endA) [Streptococcus thermophilus strain S24734]
ATGGTAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTAATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTTCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGACGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTAATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	70.238	86.007	0.604
endA	Streptococcus pneumoniae D39	70.238	86.007	0.604
endA	Streptococcus pneumoniae R6	70.238	86.007	0.604
endA	Streptococcus pneumoniae TIGR4	70.238	86.007	0.604