Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   J7T60_RS07640 Genome accession   NZ_CP072436
Coordinates   1455830..1456906 (-) Length   358 a.a.
NCBI ID   WP_372433426.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24735     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1450830..1461906
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7T60_RS07620 (J7T60_07545) - 1451942..1454008 (-) 2067 WP_022096502.1 sodium:proton antiporter -
  J7T60_RS07625 (J7T60_07550) - 1454017..1454259 (-) 243 WP_011226461.1 hypothetical protein -
  J7T60_RS07630 (J7T60_07555) - 1454256..1454804 (-) 549 WP_011226462.1 class I SAM-dependent methyltransferase -
  J7T60_RS07635 (J7T60_07560) - 1454801..1455745 (-) 945 WP_011226463.1 TIGR01212 family radical SAM protein -
  J7T60_RS07640 (J7T60_07565) sepM 1455830..1456906 (-) 1077 WP_372433426.1 SepM family pheromone-processing serine protease Regulator
  J7T60_RS07645 (J7T60_07570) coaD 1456884..1457381 (-) 498 WP_011226465.1 pantetheine-phosphate adenylyltransferase -
  J7T60_RS07650 (J7T60_07575) rsmD 1457415..1458014 (-) 600 Protein_1453 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  J7T60_RS07655 (J7T60_07580) trxB 1458105..1459058 (-) 954 WP_255136104.1 thioredoxin-disulfide reductase -
  J7T60_RS07660 (J7T60_07585) - 1459091..1459315 (-) 225 WP_087010135.1 DUF4059 family protein -
  J7T60_RS07665 (J7T60_07590) - 1459530..1460273 (-) 744 WP_084829069.1 amino acid ABC transporter ATP-binding protein -
  J7T60_RS07670 (J7T60_07595) - 1460273..1461019 (-) 747 WP_179970821.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 39170.03 Da        Isoelectric Point: 9.4944

>NTDB_id=553003 J7T60_RS07640 WP_372433426.1 1455830..1456906(-) (sepM) [Streptococcus thermophilus strain S24735]
MANKTKSKSLLEKMWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVNKKADDSKGSYNFVAVAQTKAT
LALMLYAQFNDFAKLQTAEEATGNYSDEDFVRINQFYMETSQNQAVYQGLTLAGKEVSLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSTDMIKYVQGLKLGSKVKVTYMRDGKEKTATGKIIKIANGKNGIGIGLTDHTEIKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGAVGDIGGAYLKVKSAADSGADIFFVPNNLVTKEMKKADPD
AKTNYQEAKEAAEKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=553003 J7T60_RS07640 WP_372433426.1 1455830..1456906(-) (sepM) [Streptococcus thermophilus strain S24735]
GTGGCAAACAAGACAAAATCTAAATCGCTATTAGAGAAAATGTGGCGTATTAAGTGGTGGTTATTAAGTATTTTTACGGT
ACTTTTCCTCCTTTTTGCCCTCTTTTTCCCGCTCAATAATTACTATGTGGAGCTTCCGGGTGGTGCTTTTGATACCAAGG
AAGTCTTGACAGTGAATAAGAAAGCTGATGATTCTAAGGGCTCCTATAATTTTGTGGCGGTGGCTCAAACCAAGGCGACT
TTGGCCTTGATGCTCTATGCTCAGTTTAATGATTTTGCAAAGCTTCAAACGGCTGAAGAGGCAACTGGAAATTACTCTGA
TGAAGATTTCGTGCGCATCAACCAATTTTACATGGAGACTTCTCAAAACCAAGCGGTTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGTTAGTTTGGAGTATATGGGTGTCTATGTGCTTCAGGTTGCTGATGATTCTAGCTTCAAGGGTGTCCTCAAT
ATTGCTGATACGGTGACGGCTGTTAATGGTAAGACCTTTGATAATTCTACTGACATGATTAAATACGTTCAAGGACTTAA
GCTGGGTTCAAAGGTCAAGGTCACTTATATGAGAGATGGCAAAGAAAAGACTGCTACTGGTAAGATTATTAAGATTGCCA
ATGGCAAAAATGGTATTGGTATCGGCCTAACGGACCATACTGAGATCAAGAGTCCTGAGAATGTTAAGTTTAAACTGGAT
GGTGTCGGTGGGCCAAGTGCTGGTCTTATGTTTACCTTGGCTATTTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGG
CCGCAAGATTGCTGGTACAGGAACTATTGAAAAAGATGGGGCTGTCGGTGATATCGGTGGGGCCTATCTCAAGGTGAAAT
CTGCGGCTGATAGTGGCGCAGACATTTTCTTCGTGCCAAATAATCTAGTAACTAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAGACTAATTATCAAGAGGCCAAGGAAGCTGCCGAGAAACTGGGGACCAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAATGA

Domains


Predicted by InterproScan.

(137-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

62.757

95.251

0.598