Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   J7T60_RS03655 Genome accession   NZ_CP072436
Coordinates   681533..681826 (+) Length   97 a.a.
NCBI ID   WP_372433528.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24735     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 676533..686826
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7T60_RS03635 (J7T60_03610) - 677641..678783 (+) 1143 WP_179971279.1 AbiH family protein -
  J7T60_RS03640 (J7T60_03615) - 678949..679656 (+) 708 WP_179971280.1 hypothetical protein -
  J7T60_RS03645 (J7T60_03620) - 679855..681009 (+) 1155 WP_232085724.1 restriction endonuclease subunit S -
  J7T60_RS03650 (J7T60_03625) - 681174..681543 (+) 370 Protein_658 type II toxin-antitoxin system RelE/ParE family toxin -
  J7T60_RS03655 (J7T60_03630) HI0659 681533..681826 (+) 294 WP_372433528.1 helix-turn-helix domain-containing protein Machinery gene
  J7T60_RS03660 (J7T60_03635) - 681848..683449 (+) 1602 WP_179971281.1 type I restriction-modification system subunit M -
  J7T60_RS03665 (J7T60_03640) - 683526..683948 (+) 423 Protein_661 PD-(D/E)XK nuclease family transposase -
  J7T60_RS03670 (J7T60_03645) - 684043..685047 (+) 1005 WP_179971282.1 DNA/RNA non-specific endonuclease -
  J7T60_RS03675 (J7T60_03650) - 685197..685757 (+) 561 WP_096811368.1 LemA family protein -
  J7T60_RS03680 (J7T60_03655) htpX 685759..686658 (+) 900 WP_164178021.1 zinc metalloprotease HtpX -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10758.49 Da        Isoelectric Point: 5.8962

>NTDB_id=552984 J7T60_RS03655 WP_372433528.1 681533..681826(+) (HI0659) [Streptococcus thermophilus strain S24735]
MKNSAIGSNWKDVRAELFTKEEILESDLRVAIMTELIEARHEKGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVI
ASLGKTLAVVPLEQERV

Nucleotide


Download         Length: 294 bp        

>NTDB_id=552984 J7T60_RS03655 WP_372433528.1 681533..681826(+) (HI0659) [Streptococcus thermophilus strain S24735]
ATGAAGAATAGTGCCATCGGTAGCAATTGGAAAGATGTGAGAGCAGAGCTCTTCACCAAGGAAGAAATCCTGGAAAGTGA
TTTACGGGTCGCGATTATGACTGAGCTGATCGAGGCTCGACACGAAAAGGGCATTAGCCAAAAGAAACTAGAAGAACTCA
GTGGGGTCAGTCAACCGGTCATCGCTCGGATGGAGACAGGAAAGACCAGTCCTCAATTGGATACAGTTTTGAAAGTCATA
GCTAGTCTGGGCAAGACTCTCGCTGTCGTCCCACTGGAACAAGAAAGGGTCTAA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

59.341

93.814

0.557