Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   J7U23_RS07770 Genome accession   NZ_CP072435
Coordinates   1505682..1506413 (-) Length   243 a.a.
NCBI ID   WP_179971024.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24736     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1500682..1511413
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7U23_RS07745 (J7U23_07685) - 1501731..1502912 (+) 1182 WP_002951656.1 NAD(P)/FAD-dependent oxidoreductase -
  J7U23_RS07755 (J7U23_07695) trmB 1503148..1503789 (-) 642 WP_002947526.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  J7U23_RS07760 (J7U23_07700) ccrZ 1503799..1504590 (-) 792 WP_002951667.1 cell cycle regulator CcrZ -
  J7U23_RS07765 (J7U23_07705) pptB 1504648..1505682 (-) 1035 WP_372433575.1 ABC transporter permease Regulator
  J7U23_RS07770 (J7U23_07710) pptA 1505682..1506413 (-) 732 WP_179971024.1 ABC transporter ATP-binding protein Regulator
  J7U23_RS07775 (J7U23_07715) - 1506478..1506897 (+) 420 WP_179971025.1 HIT family protein -
  J7U23_RS07780 (J7U23_07720) - 1506894..1507202 (+) 309 WP_096811620.1 hypothetical protein -
  J7U23_RS07785 - 1507244..1507405 (-) 162 WP_232085674.1 hypothetical protein -
  J7U23_RS07790 - 1507754..1507924 (-) 171 WP_011226439.1 hypothetical protein -
  J7U23_RS07795 (J7U23_07730) - 1507994..1508629 (-) 636 WP_179971026.1 DUF4230 domain-containing protein -
  J7U23_RS07800 - 1508648..1508773 (-) 126 WP_011681534.1 hypothetical protein -
  J7U23_RS07805 (J7U23_07735) - 1509182..1511281 (-) 2100 WP_022096464.1 ATP-dependent Clp protease ATP-binding subunit -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26846.09 Da        Isoelectric Point: 4.4606

>NTDB_id=552940 J7U23_RS07770 WP_179971024.1 1505682..1506413(-) (pptA) [Streptococcus thermophilus strain S24736]
MLKLEKVTGGYANILVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDPASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKANGKSILMSTHVLDSAEKMCDRFVILHHGQILAQGTIDELRQTFGDSSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=552940 J7U23_RS07770 WP_179971024.1 1505682..1506413(-) (pptA) [Streptococcus thermophilus strain S24736]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCTCGTCCTAAAAGATGTCACTTTTGAGGTGGCTGATGG
CGAATTGGTTGGTCTCATTGGTCTTAATGGTGCTGGGAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCCT
ATGGAGGACAGATTGCCATTGATGGGTTAACTATTCAACAAGATCCAGCTAGCTATCGTCAGAAGATTGGCTATATTCCT
GAAACGCCAAGTCTTTATGAAGAATTGACGCTTCGTGAACATTTGGAAACGGTATTGATGGCCTATGGTCTTGATGTGAC
TGAGGGTATGGCACGTGCGGACAAGTACCTCAAACTCTTTCGCTTAGATGAAAAGTTGGACTGGTTCCCGACTCAGTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCCTTTATTGTGAATCCAAGTCTTTTCATTGTTGATGAGCCCTTT
TTGGGATTGGATCCCTTGGCGATTTCTGATTTGATTGAGCTTCTGGCTGAGGAAAAAGCCAATGGCAAGTCTATTCTCAT
GTCGACTCACGTTTTGGATTCAGCTGAGAAGATGTGTGATCGCTTTGTGATTTTGCACCATGGACAGATCTTGGCACAGG
GGACGATTGATGAGCTTCGTCAGACCTTTGGTGACAGTAGTGCTAGTCTTAACGATATCTATATGCAGTTGACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

99.588

100

0.996
  pptA Streptococcus salivarius strain HSISS4

96.708

100

0.967