Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   J7U23_RS02270 Genome accession   NZ_CP072435
Coordinates   415789..417567 (+) Length   592 a.a.
NCBI ID   WP_207559749.1    Uniprot ID   A0A3G6K1P0
Organism   Streptococcus thermophilus strain S24736     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 410789..422567
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7U23_RS02250 (J7U23_02250) gdhA 411327..412679 (+) 1353 WP_011680803.1 NADP-specific glutamate dehydrogenase -
  J7U23_RS02255 (J7U23_02255) - 412936..413346 (+) 411 WP_011225559.1 peptide deformylase -
  J7U23_RS02260 (J7U23_02260) rcrR 413538..413981 (+) 444 WP_372589959.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  J7U23_RS02265 (J7U23_02265) rcrP 413985..415799 (+) 1815 WP_084829391.1 ABC transporter ATP-binding protein Regulator
  J7U23_RS02270 (J7U23_02270) rcrQ 415789..417567 (+) 1779 WP_207559749.1 ABC transporter ATP-binding protein Regulator
  J7U23_RS02275 (J7U23_02275) - 417723..418094 (+) 372 WP_041829277.1 hypothetical protein -
  J7U23_RS02280 - 418117..419281 (+) 1165 Protein_388 sensor histidine kinase -
  J7U23_RS02285 (J7U23_02285) pyrH 419517..420254 (+) 738 WP_232556941.1 UMP kinase -
  J7U23_RS02290 (J7U23_02290) frr 420269..420826 (+) 558 WP_011225565.1 ribosome recycling factor -
  J7U23_RS02295 (J7U23_02295) cvfB 420917..421774 (+) 858 WP_022096857.1 RNA-binding virulence regulatory protein CvfB -
  J7U23_RS02300 (J7U23_02300) - 421783..421998 (+) 216 WP_002944188.1 YozE family protein -

Sequence

Protein


Download         Length: 592 a.a.        Molecular weight: 65175.25 Da        Isoelectric Point: 5.1097

>NTDB_id=552913 J7U23_RS02270 WP_207559749.1 415789..417567(+) (rcrQ) [Streptococcus thermophilus strain S24736]
MENKPKTSSYKRLKPYIKGFQVPFVLAIVGAIISAVITVIGPDKLKEITNLITDGITPTKMGVIPGIDLDKVGSIALTLA
VLYAISAIVGYLQSFTVVTITQRFSQRFRTAIQKKINTVPLNYFDSHSQGDILSRVTNDVDLLGQSLSQGLGTLITSSIL
LVAAIIMMFYSNVTMAFTAIGSVLIGFVLVAFIMGFSQPLFKRQQENLANINGYIEEIYTGQAVVTSYNASKESSQDFKG
LNDKLYNSMWQSQFISGIMMPLMIFIGNFGYVMVCLVGAIKVIDGSLTIGDVVAFMTYVRIFSQPLSQIAQGITQLQSAT
AAIGRIFEFLEEKDMDDESAKTAELTDTKGQVVFDHVSFGYTPEKTIIHDFSALAKPGQKIAIVGPTGAGKTTIVNLLMK
FYNIDKGRITIDGVDTNDMKRETVHDQFSMVLQDTWLFEGTIRDNLIYNQENISDEQVIATAKAVGVHHFITTLPKGYDT
YLDDSVTLSVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKD
GNIIEQGNHDELMAANGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1779 bp        

>NTDB_id=552913 J7U23_RS02270 WP_207559749.1 415789..417567(+) (rcrQ) [Streptococcus thermophilus strain S24736]
ATGGAAAATAAGCCAAAAACATCGTCCTATAAACGTTTAAAACCCTATATTAAAGGTTTCCAAGTTCCCTTTGTCCTTGC
GATTGTTGGAGCCATTATTTCAGCAGTTATAACTGTTATTGGACCTGATAAATTAAAAGAAATCACCAATCTTATTACAG
ATGGGATTACGCCAACTAAGATGGGGGTTATTCCGGGCATCGATTTAGACAAGGTGGGCAGCATTGCTTTAACCTTGGCT
GTTTTATATGCCATTTCAGCCATTGTTGGTTACTTACAAAGTTTTACCGTTGTAACAATTACGCAACGATTTTCACAACG
TTTCCGTACAGCAATCCAAAAGAAAATCAACACCGTACCTCTTAATTATTTTGATAGTCATTCTCAAGGAGACATACTCT
CTCGTGTGACTAATGACGTTGACCTTTTGGGACAATCGCTTAGTCAGGGTCTGGGTACTCTAATTACTTCAAGCATTCTC
TTGGTAGCAGCCATTATTATGATGTTCTACTCAAATGTTACTATGGCTTTCACTGCGATTGGTTCTGTCTTGATAGGATT
TGTTCTAGTAGCCTTTATCATGGGCTTCTCGCAACCACTTTTTAAACGCCAACAAGAAAATTTGGCTAACATTAATGGGT
ACATTGAAGAAATCTACACAGGTCAAGCAGTTGTAACGAGCTACAATGCATCTAAAGAAAGCAGTCAAGATTTCAAGGGG
CTTAATGATAAGCTCTATAATTCAATGTGGCAATCACAATTTATCTCAGGTATTATGATGCCACTCATGATTTTCATTGG
GAATTTTGGTTACGTCATGGTCTGTCTTGTGGGTGCCATCAAGGTTATTGATGGTAGCTTGACTATTGGTGATGTTGTAG
CCTTCATGACCTATGTTCGCATCTTCTCACAACCTCTTTCTCAAATTGCACAAGGGATTACACAACTCCAATCGGCAACT
GCAGCTATTGGTCGTATCTTTGAATTTTTGGAAGAAAAAGATATGGACGACGAGTCAGCTAAGACAGCTGAATTGACAGA
TACTAAAGGCCAAGTTGTCTTTGACCATGTTTCCTTTGGTTATACTCCTGAAAAGACTATTATTCATGATTTTTCAGCTC
TTGCTAAGCCAGGTCAAAAGATTGCGATTGTTGGTCCAACAGGTGCTGGTAAGACGACTATTGTTAACTTGCTTATGAAG
TTTTATAATATCGATAAAGGCCGTATCACCATTGACGGTGTGGATACGAACGACATGAAACGTGAAACCGTTCATGATCA
ATTCTCTATGGTGCTTCAAGACACTTGGCTCTTTGAAGGAACGATTCGAGATAATTTGATTTACAACCAAGAAAATATCT
CTGACGAGCAAGTTATTGCTACAGCCAAGGCCGTGGGTGTTCATCACTTCATCACCACACTTCCAAAAGGTTATGATACC
TATTTGGATGATTCTGTTACTTTATCAGTTGGTCAGAAACAACTTTTAACCATTGCGCGTGCACTTCTTAAGGATGCCCC
TCTTCTTATCTTGGACGAGGCAACATCATCAGTTGACACACGAACAGAAGAATTGATTCAGAAGGCTATGGACAAGCTTA
TGGAGGGTCGTACATCCTTTGTCATTGCCCACCGCTTATCAACCATTCGAAATGCGGACCTCATCCTTGTGATGAAAGAT
GGTAACATTATTGAACAGGGAAATCATGATGAGCTCATGGCAGCAAATGGATTCTATGCTGATCTTTATAATAGTCAGTT
TACGGAAGAAGTGGCCTAG

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(25-306)

ABC transporter (ABC_tran)

(371-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3G6K1P0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

69.088

100

0.691