Detailed information NTG0552808

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: J7U07_RS05405
• Genome accession: NZ_CP072433
• Coordinates: 1025996..1026877 (-)
• Length: 293 a.a.
• NCBI ID: WP_011681210.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain S24743
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1020996..1031877

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7U07_RS05380 (J7U07_05290)	vicR	1021700..1022407 (-)	708	WP_011681206.1	response regulator YycF	Regulator
J7U07_RS05385 (J7U07_05295)	-	1022934..1023701 (+)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
J7U07_RS05390 (J7U07_05300)	-	1023713..1024546 (+)	834	WP_014608373.1	transporter substrate-binding domain-containing protein	-
J7U07_RS05395 (J7U07_05305)	-	1024564..1025262 (+)	699	WP_014608374.1	amino acid ABC transporter permease	-
J7U07_RS05400 (J7U07_05310)	-	1025274..1025924 (+)	651	WP_014608375.1	amino acid ABC transporter permease	-
J7U07_RS05405 (J7U07_05315)	endA	1025996..1026877 (-)	882	WP_011681210.1	DNA/RNA non-specific endonuclease	Machinery gene
J7U07_RS05410 (J7U07_05320)	-	1026939..1027127 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
J7U07_RS05415 (J7U07_05325)	murA	1027129..1028400 (-)	1272	WP_014608377.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
J7U07_RS05420 (J7U07_05330)	-	1028470..1028706 (-)	237	WP_002946959.1	DUF1146 family protein	-
J7U07_RS05425 (J7U07_05335)	galE	1028894..1029907 (-)	1014	WP_011681212.1	UDP-glucose 4-epimerase GalE	-
J7U07_RS05430 (J7U07_05340)	-	1029922..1030377 (-)	456	WP_024009932.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=552808 J7U07_RS05405 WP_011681210.1 1025996..1026877(-) (endA) [Streptococcus thermophilus strain S24743]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=552808 J7U07_RS05405 WP_011681210.1 1025996..1026877(-) (endA) [Streptococcus thermophilus strain S24743]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTAGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594