Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   J7U07_RS02280 Genome accession   NZ_CP072433
Coordinates   423083..424861 (+) Length   592 a.a.
NCBI ID   WP_207559749.1    Uniprot ID   A0A3G6K1P0
Organism   Streptococcus thermophilus strain S24743     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 418083..429861
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7U07_RS02260 (J7U07_02230) gdhA 418620..419972 (+) 1353 WP_011680803.1 NADP-specific glutamate dehydrogenase -
  J7U07_RS02265 (J7U07_02235) - 420231..420641 (+) 411 WP_011680804.1 peptide deformylase -
  J7U07_RS02270 (J7U07_02240) rcrR 420832..421275 (+) 444 WP_002945408.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  J7U07_RS02275 (J7U07_02245) rcrP 421279..423093 (+) 1815 WP_179971475.1 ABC transporter ATP-binding protein Regulator
  J7U07_RS02280 (J7U07_02250) rcrQ 423083..424861 (+) 1779 WP_207559749.1 ABC transporter ATP-binding protein Regulator
  J7U07_RS02285 (J7U07_02255) - 425016..425387 (+) 372 WP_041829277.1 hypothetical protein -
  J7U07_RS02290 (J7U07_02260) - 425410..426574 (+) 1165 Protein_390 sensor histidine kinase -
  J7U07_RS02295 (J7U07_02265) pyrH 426810..427547 (+) 738 WP_002949867.1 UMP kinase -
  J7U07_RS02300 (J7U07_02270) frr 427562..428119 (+) 558 WP_011225565.1 ribosome recycling factor -
  J7U07_RS02305 (J7U07_02275) cvfB 428210..429067 (+) 858 WP_022096857.1 RNA-binding virulence regulatory protein CvfB -
  J7U07_RS02310 (J7U07_02280) - 429076..429291 (+) 216 WP_002944188.1 YozE family protein -

Sequence

Protein


Download         Length: 592 a.a.        Molecular weight: 65175.25 Da        Isoelectric Point: 5.1097

>NTDB_id=552795 J7U07_RS02280 WP_207559749.1 423083..424861(+) (rcrQ) [Streptococcus thermophilus strain S24743]
MENKPKTSSYKRLKPYIKGFQVPFVLAIVGAIISAVITVIGPDKLKEITNLITDGITPTKMGVIPGIDLDKVGSIALTLA
VLYAISAIVGYLQSFTVVTITQRFSQRFRTAIQKKINTVPLNYFDSHSQGDILSRVTNDVDLLGQSLSQGLGTLITSSIL
LVAAIIMMFYSNVTMAFTAIGSVLIGFVLVAFIMGFSQPLFKRQQENLANINGYIEEIYTGQAVVTSYNASKESSQDFKG
LNDKLYNSMWQSQFISGIMMPLMIFIGNFGYVMVCLVGAIKVIDGSLTIGDVVAFMTYVRIFSQPLSQIAQGITQLQSAT
AAIGRIFEFLEEKDMDDESAKTAELTDTKGQVVFDHVSFGYTPEKTIIHDFSALAKPGQKIAIVGPTGAGKTTIVNLLMK
FYNIDKGRITIDGVDTNDMKRETVHDQFSMVLQDTWLFEGTIRDNLIYNQENISDEQVIATAKAVGVHHFITTLPKGYDT
YLDDSVTLSVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKD
GNIIEQGNHDELMAANGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1779 bp        

>NTDB_id=552795 J7U07_RS02280 WP_207559749.1 423083..424861(+) (rcrQ) [Streptococcus thermophilus strain S24743]
ATGGAAAATAAGCCAAAAACATCGTCCTATAAACGTTTAAAACCCTATATTAAAGGTTTCCAAGTTCCCTTTGTCCTTGC
GATTGTTGGAGCCATTATTTCAGCAGTTATAACTGTTATTGGACCTGATAAATTAAAAGAAATCACCAATCTTATTACAG
ATGGGATTACGCCAACTAAGATGGGGGTTATTCCGGGCATCGATTTAGACAAGGTGGGCAGCATTGCTTTAACCTTGGCT
GTTTTATATGCCATTTCAGCCATTGTTGGTTACTTACAAAGTTTTACCGTTGTAACAATTACGCAACGATTTTCACAACG
TTTCCGTACAGCAATCCAAAAGAAAATCAACACCGTACCTCTTAATTATTTTGATAGTCATTCTCAAGGAGACATACTCT
CTCGTGTGACTAATGACGTTGACCTTTTGGGACAATCGCTTAGTCAGGGTCTGGGTACTCTAATTACTTCAAGCATTCTC
TTGGTAGCAGCCATTATTATGATGTTCTACTCAAATGTTACTATGGCTTTCACTGCGATTGGTTCTGTCTTGATAGGATT
TGTTCTAGTAGCCTTTATCATGGGCTTCTCGCAACCACTTTTTAAACGCCAACAAGAAAATTTGGCTAACATTAATGGGT
ACATTGAAGAAATCTACACAGGTCAAGCAGTTGTAACGAGCTACAATGCATCTAAAGAAAGCAGTCAAGATTTCAAGGGG
CTTAATGATAAGCTCTATAATTCAATGTGGCAATCACAATTTATCTCAGGTATTATGATGCCACTCATGATTTTCATTGG
GAATTTTGGTTACGTCATGGTCTGTCTTGTGGGTGCCATCAAGGTTATTGATGGTAGCTTGACTATTGGTGATGTTGTAG
CCTTCATGACCTATGTTCGCATCTTCTCACAACCTCTTTCTCAAATTGCACAAGGGATTACACAACTCCAATCGGCAACT
GCAGCTATTGGTCGTATCTTTGAATTTTTGGAAGAAAAAGATATGGACGACGAGTCAGCTAAGACAGCTGAATTGACAGA
TACTAAAGGCCAAGTTGTCTTTGACCATGTTTCCTTTGGTTATACTCCTGAAAAGACTATTATTCATGATTTTTCAGCTC
TTGCTAAGCCAGGTCAAAAGATTGCGATTGTTGGTCCAACAGGTGCTGGTAAGACGACTATTGTTAACTTGCTTATGAAG
TTTTATAATATCGATAAAGGCCGTATCACCATTGACGGTGTGGATACGAACGACATGAAACGTGAAACCGTTCATGATCA
ATTCTCTATGGTGCTTCAAGACACTTGGCTCTTTGAAGGAACGATTCGAGATAATTTGATTTACAACCAAGAAAATATCT
CTGACGAGCAAGTTATTGCTACAGCCAAGGCCGTGGGTGTTCATCACTTCATCACCACACTTCCAAAAGGTTATGATACC
TATTTGGATGATTCTGTTACTTTATCAGTTGGTCAGAAACAACTTTTAACCATTGCGCGTGCACTTCTTAAGGATGCCCC
TCTTCTTATCTTGGACGAGGCAACATCATCAGTTGACACACGAACAGAAGAATTGATTCAGAAGGCTATGGACAAGCTTA
TGGAGGGTCGTACATCCTTTGTCATTGCCCACCGCTTATCAACCATTCGAAATGCGGACCTCATCCTTGTGATGAAAGAT
GGTAACATTATTGAACAGGGAAATCATGATGAGCTCATGGCAGCAAATGGATTCTATGCTGATCTTTATAATAGTCAGTT
TACGGAAGAAGTGGCCTAG

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(25-306)

ABC transporter (ABC_tran)

(371-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3G6K1P0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

69.088

100

0.691