Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   J7U00_RS00090 Genome accession   NZ_CP072431
Coordinates   17424..18191 (-) Length   255 a.a.
NCBI ID   WP_002952299.1    Uniprot ID   A0AAN2DBC4
Organism   Streptococcus thermophilus strain S24745     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 12424..23191
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7U00_RS00070 (J7U00_00060) ychF 12959..14074 (-) 1116 WP_207560004.1 redox-regulated ATPase YchF -
  J7U00_RS00075 (J7U00_00065) - 14287..14478 (-) 192 WP_002886272.1 DUF951 domain-containing protein -
  J7U00_RS00080 (J7U00_00070) dnaN 14529..15665 (-) 1137 WP_011680575.1 DNA polymerase III subunit beta -
  J7U00_RS00085 (J7U00_00075) dnaA 15820..17184 (-) 1365 WP_002948584.1 chromosomal replication initiator protein DnaA -
  J7U00_RS00090 (J7U00_00080) spo0J 17424..18191 (-) 768 WP_002952299.1 ParB/RepB/Spo0J family partition protein Regulator
  J7U00_RS00095 (J7U00_00085) htrA 18257..19492 (-) 1236 WP_207560005.1 S1C family serine protease Regulator
  J7U00_RS00100 (J7U00_00090) rlmH 19697..20176 (+) 480 WP_011681766.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  J7U00_RS00105 (J7U00_00095) - 20192..20875 (+) 684 WP_011226711.1 YoaK family protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29447.81 Da        Isoelectric Point: 9.6649

>NTDB_id=552725 J7U00_RS00090 WP_002952299.1 17424..18191(-) (spo0J) [Streptococcus thermophilus strain S24745]
MSEQLKTLSISEIYPNPFQPRLKFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSHEELAKAMGKSRPYISNALRLLQLPREIQTSIENGSLSQG
HARALLAIEDSRKQLTIFQQVVAERWSVRTLEKKLQELPRKQKSKKDTHVKDKEKELERSLGLPITLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=552725 J7U00_RS00090 WP_002952299.1 17424..18191(-) (spo0J) [Streptococcus thermophilus strain S24745]
ATGTCAGAACAACTCAAAACTTTATCTATTAGTGAAATTTACCCCAATCCTTTTCAACCTCGTCTAAAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAATCAATATCAGAAAATGGTTTAATACAGCCAATTATTGTACGAAAATCTGACATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGAGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATCTACAACGATCAAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAACTTATAGTCACGAGGAGCTCGCTAAAGCTATGGGAAAATCTAGACCAT
ATATTAGTAACGCTCTTAGACTACTACAACTTCCGCGAGAGATACAAACGAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCTAGAGCACTCTTAGCTATTGAGGATTCTCGAAAGCAGTTAACCATCTTTCAGCAGGTTGTGGCTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAGGAACTTCCTAGAAAACAAAAATCTAAAAAAGATACCCATGTAAAAGATAAAG
AAAAAGAACTTGAAAGATCACTAGGTCTCCCCATAACTCTACGTTATCACAAAAATCACTCAGGAACGATTCAAATACAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATCTAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(147-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.863

100

0.569