Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   A7A1_RS18815 Genome accession   NC_019896
Coordinates   3668679..3669077 (+) Length   132 a.a.
NCBI ID   WP_015252845.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis str. BSP1     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3663679..3674077
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7A1_RS18790 (A7A1_1850) hxlR 3664413..3664775 (-) 363 WP_003246265.1 transcriptional activator HxlR -
  A7A1_RS18795 (A7A1_1851) hxlA 3665007..3665639 (+) 633 WP_003234604.1 3-hexulose-6-phosphate synthase -
  A7A1_RS18800 (A7A1_1852) hxlB 3665645..3666202 (+) 558 WP_015252842.1 6-phospho-3-hexuloisomerase -
  A7A1_RS18805 (A7A1_1853) tlpC 3666313..3668034 (+) 1722 WP_015252843.1 methyl-accepting chemotaxis protein TlpC -
  A7A1_RS18810 nucA 3668202..3668652 (+) 451 Protein_3697 DNA-entry nuclease -
  A7A1_RS18815 (A7A1_1855) nin/comJ 3668679..3669077 (+) 399 WP_015252845.1 DNA-entry nuclease inhibitor Regulator
  A7A1_RS18820 (A7A1_1856) bglC 3669114..3670547 (-) 1434 WP_015252846.1 6-phospho-beta-glucosidase -
  A7A1_RS18825 (A7A1_1857) - 3670620..3671347 (-) 728 Protein_3700 AAA family ATPase -
  A7A1_RS18830 - 3671366..3671706 (-) 341 Protein_3701 DUF3147 family protein -
  A7A1_RS18835 (A7A1_1858) - 3671694..3672116 (-) 423 WP_174616579.1 MarR family transcriptional regulator -
  A7A1_RS18840 (A7A1_1859) yckD 3672244..3672576 (-) 333 WP_015252849.1 YckD family protein -
  A7A1_RS18845 - 3672658..3672973 (-) 316 Protein_3704 RDD family protein -
  A7A1_RS21705 - 3673009..3673197 (-) 189 Protein_3705 hypothetical protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14935.86 Da        Isoelectric Point: 4.7078

>NTDB_id=55271 A7A1_RS18815 WP_015252845.1 3668679..3669077(+) (nin/comJ) [Bacillus subtilis subsp. subtilis str. BSP1]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVNSYETKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=55271 A7A1_RS18815 WP_015252845.1 3668679..3669077(+) (nin/comJ) [Bacillus subtilis subsp. subtilis str. BSP1]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAACAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

98.485

100

0.985

Multiple sequence alignment