Detailed information NTG0055270

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: A7A1_RS18640
• Genome accession: NC_019896
• Coordinates: 3610818..3611966 (-)
• Length: 382 a.a.
• NCBI ID: WP_015252823.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis str. BSP1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3605818..3616966

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A7A1_RS18610 (A7A1_3097)	yclO	3606536..3607483 (-)	948	WP_015252820.1	petrobactin ABC transporter permease YclO	-
A7A1_RS18615 (A7A1_3098)	yclN	3607476..3608427 (-)	952	Protein_3655	petrobactin ABC transporter permease YclN	-
A7A1_RS18620 (A7A1_3099)	thrD	3608811..3610175 (+)	1365	WP_015252822.1	aspartate kinase	-
A7A1_RS18625	yczN	3610328..3610441 (+)	114	WP_003234495.1	YjcZ family sporulation protein	-
A7A1_RS21325	yczM	3610523..3610612 (+)	90	WP_015482794.1	YjcZ family sporulation protein	-
A7A1_RS18635 (A7A1_3100)	phrC	3610712..3610834 (-)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
A7A1_RS18640 (A7A1_3101)	rapC	3610818..3611966 (-)	1149	WP_015252823.1	response regulator aspartate phosphatase RapC	Regulator
A7A1_RS18645 (A7A1_3102)	yclK	3612130..3613551 (-)	1422	WP_015252824.1	two-component system sensor histidine kinase YclK	-
A7A1_RS18650	yclJ	3613538..3614221 (-)	684	WP_015482792.1	two-component system response regulator YclJ	-
A7A1_RS18655 (A7A1_2120)	yclI	3614434..3615894 (+)	1461	WP_015252826.1	ABC transporter permease	-
A7A1_RS18660 (A7A1_2121)	yclH	3615910..3616590 (+)	681	WP_003234507.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45677.71 Da
• Isoelectric Point: 5.0423

>NTDB_id=55270 A7A1_RS18640 WP_015252823.1 3610818..3611966(-) (rapC) [Bacillus subtilis subsp. subtilis str. BSP1]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKRGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=55270 A7A1_RS18640 WP_015252823.1 3610818..3611966(-) (rapC) [Bacillus subtilis subsp. subtilis str. BSP1]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
CCGCGGGATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATCACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACTTTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACGGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAATACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.476	100	0.995
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568