Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   J7T77_RS02315 Genome accession   NZ_CP072430
Coordinates   424848..425291 (+) Length   147 a.a.
NCBI ID   WP_002945408.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24746     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 419848..430291
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7T77_RS02295 (J7T77_02235) - 420363..421124 (-) 762 WP_064355432.1 NUDIX domain-containing protein -
  J7T77_RS02300 (J7T77_02240) - 421188..422294 (-) 1107 WP_372589705.1 AAA family ATPase -
  J7T77_RS02305 (J7T77_02245) gdhA 422638..423990 (+) 1353 WP_011680803.1 NADP-specific glutamate dehydrogenase -
  J7T77_RS02310 (J7T77_02250) - 424247..424657 (+) 411 WP_011680804.1 peptide deformylase -
  J7T77_RS02315 (J7T77_02255) rcrR 424848..425291 (+) 444 WP_002945408.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  J7T77_RS02320 (J7T77_02260) rcrP 425295..427109 (+) 1815 WP_179971475.1 ABC transporter ATP-binding protein Regulator
  J7T77_RS02325 (J7T77_02265) rcrQ 427099..428877 (+) 1779 WP_372589706.1 ABC transporter ATP-binding protein Regulator
  J7T77_RS02330 (J7T77_02270) - 429033..429404 (+) 372 WP_232085709.1 GNAT family acetyltransferase -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 17031.41 Da        Isoelectric Point: 9.5790

>NTDB_id=552685 J7T77_RS02315 WP_002945408.1 424848..425291(+) (rcrR) [Streptococcus thermophilus strain S24746]
MHGKDPFSDFREFINTMESRVQELGKAYGVEHLAGPQGFAVRYLFENQDKEIFIKDIEKKLSISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGKKKAQDVGHFREAIHGQLLDGISKEDAETAFRVFHQIRKNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=552685 J7T77_RS02315 WP_002945408.1 424848..425291(+) (rcrR) [Streptococcus thermophilus strain S24746]
ATGCATGGTAAAGATCCTTTTAGTGACTTCAGAGAATTCATCAATACTATGGAGTCTCGCGTGCAAGAGTTAGGTAAAGC
GTATGGTGTTGAGCATTTAGCTGGTCCACAAGGGTTTGCCGTTAGGTACTTGTTTGAGAACCAAGATAAAGAAATATTTA
TCAAAGATATTGAGAAAAAACTATCTATTTCCAAGTCAGTGGCTAGTAATTTGGTCAAACGTATGGAGAAAAATGGTTTT
GTTGAATTGGTGACATCTGACAAGGACAAACGCTACAAGTATGTTCATCTGACAGACTTAGGCAAAAAGAAGGCTCAAGA
CGTCGGACATTTCCGAGAGGCTATCCATGGACAGTTATTAGATGGTATTTCGAAAGAAGATGCTGAAACAGCATTTCGAG
TCTTTCACCAAATTCGTAAGAATTTAGAGAAAAATAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(42-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

56.028

95.918

0.537