Detailed information NTG0552642

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: J7T92_RS05480
• Genome accession: NZ_CP072429
• Coordinates: 1032512..1033393 (-)
• Length: 293 a.a.
• NCBI ID: WP_011681210.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain S24747
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1027512..1038393

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7T92_RS05455 (J7T92_05455)	vicR	1028216..1028923 (-)	708	WP_011681206.1	response regulator YycF	Regulator
J7T92_RS05460 (J7T92_05460)	-	1029450..1030217 (+)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
J7T92_RS05465 (J7T92_05465)	-	1030229..1031062 (+)	834	WP_011681208.1	transporter substrate-binding domain-containing protein	-
J7T92_RS05470 (J7T92_05470)	-	1031080..1031778 (+)	699	WP_011681209.1	amino acid ABC transporter permease	-
J7T92_RS05475 (J7T92_05475)	-	1031790..1032440 (+)	651	WP_011226088.1	amino acid ABC transporter permease	-
J7T92_RS05480 (J7T92_05480)	endA	1032512..1033393 (-)	882	WP_011681210.1	DNA/RNA non-specific endonuclease	Machinery gene
J7T92_RS05485 (J7T92_05485)	-	1033455..1033643 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
J7T92_RS05490 (J7T92_05490)	murA	1033645..1034916 (-)	1272	WP_014608377.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
J7T92_RS05495 (J7T92_05495)	-	1034986..1035222 (-)	237	WP_002946959.1	DUF1146 family protein	-
J7T92_RS05500 (J7T92_05500)	galE	1035410..1036423 (-)	1014	WP_011681212.1	UDP-glucose 4-epimerase GalE	-
J7T92_RS05505 (J7T92_05505)	-	1036438..1036893 (-)	456	WP_024009932.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=552642 J7T92_RS05480 WP_011681210.1 1032512..1033393(-) (endA) [Streptococcus thermophilus strain S24747]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=552642 J7T92_RS05480 WP_011681210.1 1032512..1033393(-) (endA) [Streptococcus thermophilus strain S24747]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTAGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594