Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK   Type   Regulator
Locus tag   A7A1_RS15185 Genome accession   NC_019896
Coordinates   2957737..2958315 (-) Length   192 a.a.
NCBI ID   WP_003245329.1    Uniprot ID   A0A809FND1
Organism   Bacillus subtilis subsp. subtilis str. BSP1     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2952737..2963315
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7A1_RS15150 (A7A1_3685) lepB 2952744..2953250 (-) 507 WP_003233128.1 signal peptidase I -
  A7A1_RS15155 (A7A1_3686) yhjE 2953252..2953875 (-) 624 WP_010886465.1 VTT domain-containing protein -
  A7A1_RS15160 (A7A1_3687) - 2954027..2954398 (+) 372 WP_014476361.1 hypothetical protein -
  A7A1_RS15165 (A7A1_3688) yhjC 2954597..2954797 (+) 201 WP_015252421.1 DUF3311 domain-containing protein -
  A7A1_RS15170 (A7A1_3689) yhjB 2954794..2956263 (+) 1470 WP_015252422.1 sodium:solute symporter -
  A7A1_RS15175 (A7A1_3690) yhjA 2956307..2956576 (-) 270 WP_003224373.1 excalibur calcium-binding domain-containing protein -
  A7A1_RS15180 (A7A1_3691) yhxD 2956793..2957692 (+) 900 WP_003245421.1 SDR family oxidoreductase -
  A7A1_RS15185 (A7A1_3692) comK 2957737..2958315 (-) 579 WP_003245329.1 competence transcription factor ComK Regulator
  A7A1_RS15190 (A7A1_3693) yhzC 2958608..2958841 (+) 234 WP_003233142.1 IDEAL domain-containing protein -
  A7A1_RS15195 (A7A1_3694) yhxC 2958869..2959726 (-) 858 WP_003245662.1 SDR family oxidoreductase -
  A7A1_RS15200 (A7A1_3695) comW 2959838..2961367 (+) 1530 WP_015252423.1 FAD-dependent oxidoreductase -
  A7A1_RS15205 (A7A1_3696) hemAT 2961505..2962803 (+) 1299 WP_015252424.1 heme-based aerotactic transducer HemAT -

Sequence

Protein


Download         Length: 192 a.a.        Molecular weight: 22429.68 Da        Isoelectric Point: 7.7153

>NTDB_id=55262 A7A1_RS15185 WP_003245329.1 2957737..2958315(-) (comK) [Bacillus subtilis subsp. subtilis str. BSP1]
MSQKTDAPLESYEVNGATIAVLPEEIDGKICSKIIEKDCVFYVNMKPLQIVDRSCRFFGSSYAGRKAGTYEVTKISHKPP
IMVDPSNQIFLFPTLSSTRPQCGWISHVHVKEFKATEFDDTEVTFSNGKTMELPISYNSFENQVYRTAWLRTKFQDRIDH
RVPKRQEFMLYPKEERTKMIYDFILRELGERY

Nucleotide


Download         Length: 579 bp        

>NTDB_id=55262 A7A1_RS15185 WP_003245329.1 2957737..2958315(-) (comK) [Bacillus subtilis subsp. subtilis str. BSP1]
ATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGCAACAATTGCCGTGCTGCCAGAAGAAATAGA
CGGCAAAATCTGTTCCAAAATTATTGAAAAAGATTGCGTGTTTTATGTCAACATGAAGCCGCTGCAAATTGTCGACAGAA
GCTGCCGATTTTTTGGATCAAGCTATGCGGGAAGAAAAGCAGGAACTTATGAAGTGACAAAAATTTCACACAAGCCGCCA
ATCATGGTGGACCCTTCGAACCAAATCTTTTTATTCCCTACACTTTCTTCGACAAGACCCCAATGCGGCTGGATTTCCCA
TGTGCATGTAAAAGAATTCAAAGCGACTGAATTCGACGATACGGAAGTGACGTTTTCGAATGGGAAAACGATGGAGCTGC
CGATCTCTTATAATTCGTTCGAGAACCAGGTATATCGAACAGCGTGGCTTAGAACCAAATTCCAAGACAGAATCGACCAC
CGCGTGCCGAAAAGGCAGGAATTTATGCTGTACCCGAAGGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGA
GCTCGGGGAGCGGTATTAG

Domains

Predicted by InterproScan.

ComK protein (ComK)

(10-158)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A809FND1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment