Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   A7A1_RS14610 Genome accession   NC_019896
Coordinates   2844411..2845562 (-) Length   383 a.a.
NCBI ID   WP_044052564.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis str. BSP1     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 2839411..2850562
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7A1_RS14580 (A7A1_0974) cwlQ 2839549..2840283 (+) 735 WP_033883583.1 bifunctional muramidase/murein lytic transglycosylase -
  A7A1_RS14585 (A7A1_0973) bhbI 2840537..2840935 (+) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  A7A1_RS14590 (A7A1_0972) spxH 2840932..2841831 (+) 900 WP_003245184.1 protease adaptor protein SpxH -
  A7A1_RS14600 - 2842146..2842313 (+) 168 WP_003244944.1 hypothetical protein -
  A7A1_RS14605 (A7A1_0971) pepF 2842351..2844180 (-) 1830 WP_003245178.1 oligoendopeptidase F -
  A7A1_RS14610 (A7A1_0970) coiA 2844411..2845562 (-) 1152 WP_044052564.1 competence protein CoiA Machinery gene
  A7A1_RS21650 - 2845606..2845728 (+) 123 WP_003245684.1 hypothetical protein -
  A7A1_RS14615 (A7A1_0969) mecA 2845723..2846379 (-) 657 WP_015252354.1 adaptor protein MecA Regulator
  A7A1_RS21655 - 2846346..2846486 (-) 141 WP_119122854.1 hypothetical protein -
  A7A1_RS14620 (A7A1_0968) yjbE 2846656..2847312 (+) 657 WP_015252355.1 YjbE family putative metal transport protein -
  A7A1_RS14625 (A7A1_0967) spx 2847355..2847750 (-) 396 WP_014476435.1 transcriptional regulator Spx -
  A7A1_RS14630 (A7A1_0966) yjbC 2847931..2848509 (-) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  A7A1_RS14635 (A7A1_0965) yjbB 2848673..2849890 (-) 1218 WP_080019554.1 MFS transporter -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44918.04 Da        Isoelectric Point: 9.9417

>NTDB_id=55255 A7A1_RS14610 WP_044052564.1 2844411..2845562(-) (coiA) [Bacillus subtilis subsp. subtilis str. BSP1]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGVGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=55255 A7A1_RS14610 WP_044052564.1 2844411..2845562(-) (coiA) [Bacillus subtilis subsp. subtilis str. BSP1]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGAGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATTCATCGGGCAGGTGTAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGATAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.928

97.389

0.963


Multiple sequence alignment