Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   A7A1_RS13200 Genome accession   NC_019896
Coordinates   2594864..2595328 (+) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis subsp. subtilis str. BSP1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2589864..2600328
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7A1_RS13180 (A7A1_1552) fadH 2591053..2591848 (-) 796 Protein_2614 2,4-dienoyl-CoA reductase -
  A7A1_RS13185 (A7A1_1551) ppeE 2591959..2592819 (+) 861 WP_003232400.1 metallophosphoesterase -
  A7A1_RS13190 (A7A1_1550) ltdD 2592876..2593370 (+) 495 WP_080019551.1 L,D-transpeptidase family protein -
  A7A1_RS13195 (A7A1_1549) ykuC 2593446..2594738 (+) 1293 WP_015252195.1 MFS transporter -
  A7A1_RS13200 (A7A1_1548) kre 2594864..2595328 (+) 465 WP_003232406.1 YkyB family protein Regulator
  A7A1_RS13205 (A7A1_1547) cheV 2595372..2596283 (-) 912 WP_014476655.1 chemotaxis protein CheV -
  A7A1_RS13210 - 2596487..2596648 (+) 162 WP_003245246.1 hypothetical protein -
  A7A1_RS13215 (A7A1_1546) dapX 2596850..2598031 (+) 1182 WP_015252196.1 aminotransferase A -
  A7A1_RS13220 (A7A1_1545) kinA 2598041..2599861 (-) 1821 WP_015252197.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=55251 A7A1_RS13200 WP_003232406.1 2594864..2595328(+) (kre) [Bacillus subtilis subsp. subtilis str. BSP1]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=55251 A7A1_RS13200 WP_003232406.1 2594864..2595328(+) (kre) [Bacillus subtilis subsp. subtilis str. BSP1]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment