Detailed information NTG0552333

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: J6B58_RS02705
• Genome accession: NZ_CP072398
• Coordinates: 570249..571307 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain KSK2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 565249..576307

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J6B58_RS02690 (J6B58_02690)	-	566354..566686 (+)	333	WP_000169594.1	hypothetical protein	-
J6B58_RS02695 (J6B58_02695)	-	566689..567513 (+)	825	WP_002019666.1	putative RNA methyltransferase	-
J6B58_RS02700 (J6B58_02700)	ponA	567531..570086 (-)	2556	WP_000736670.1	penicillin-binding protein PBP1a	-
J6B58_RS02705 (J6B58_02705)	pilM	570249..571307 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
J6B58_RS02710 (J6B58_02710)	pilN	571307..571948 (+)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
J6B58_RS02715 (J6B58_02715)	pilO	571945..572685 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
J6B58_RS02720 (J6B58_02720)	pilP	572696..573223 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
J6B58_RS02725 (J6B58_02725)	pilQ	573291..575456 (+)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
J6B58_RS02730 (J6B58_02730)	aroK	575468..576037 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=552333 J6B58_RS02705 WP_002014066.1 570249..571307(+) (pilM) [Acinetobacter baumannii strain KSK2]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=552333 J6B58_RS02705 WP_002014066.1 570249..571307(+) (pilM) [Acinetobacter baumannii strain KSK2]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTACTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTAGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423