Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   A7A1_RS08210 Genome accession   NC_019896
Coordinates   1591471..1592238 (+) Length   255 a.a.
NCBI ID   WP_014477369.1    Uniprot ID   A0A0D1L7G7
Organism   Bacillus subtilis subsp. subtilis str. BSP1     
Function   ssDNA annealing; plasmid transformation (predicted from homology)   
DNA processing Homologous recombination

Genomic Context

Location: 1586471..1597238
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7A1_RS08180 (A7A1_3217) pgpH 1586766..1588901 (+) 2136 WP_015251683.1 cyclic-di-AMP phosphodiesterase PgpH -
  A7A1_RS08185 (A7A1_3218) ybeY 1588902..1589375 (+) 474 WP_003230039.1 rRNA maturation RNase YbeY -
  A7A1_RS08190 (A7A1_3219) unpK 1589356..1589727 (+) 372 WP_015384119.1 diacylglycerol kinase family protein -
  A7A1_RS08195 (A7A1_3220) - 1589846..1590257 (+) 412 Protein_1619 cytidine deaminase -
  A7A1_RS08200 (A7A1_3221) era 1590238..1591143 (+) 906 WP_015251686.1 GTPase Era -
  A7A1_RS08205 yqzL 1591291..1591434 (+) 144 WP_003230053.1 YqzL family protein -
  A7A1_RS08210 (A7A1_3222) recO 1591471..1592238 (+) 768 WP_014477369.1 DNA repair protein RecO Machinery gene
  A7A1_RS08215 (A7A1_3223) glyQ 1592535..1593422 (+) 888 WP_003226213.1 glycine--tRNA ligase subunit alpha -
  A7A1_RS08220 (A7A1_3224) glyS 1593415..1595454 (+) 2040 WP_015251687.1 glycine--tRNA ligase subunit beta -
  A7A1_RS08225 (A7A1_3225) ccpN 1595587..1596225 (+) 639 WP_003237058.1 transcriptional regulator CcpN -
  A7A1_RS08230 (A7A1_3226) ppsR 1596251..1597063 (+) 813 WP_015251688.1 pyruvate, water dikinase regulatory protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29342.05 Da        Isoelectric Point: 8.3080

>NTDB_id=55232 A7A1_RS08210 WP_014477369.1 1591471..1592238(+) (recO) [Bacillus subtilis subsp. subtilis str. BSP1]
MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGAKKPNSRLSAVSQPFLYGSFLMQKTSGLGTLQQGEMILSMRG
IREDLFLTAYAAYIAELVDRGTEEKKPNPYLFEFILESLKQLNEGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSQDG
TFHFSVRDNGFICHRCFEKDPYRIPIKPQTARLLRLFYYFDLSRLGNVSLKEETKAELKQVIDLYYEEYSGLYLKSKRFL
DQMESMKHLMGENKS

Nucleotide


Download         Length: 768 bp        

>NTDB_id=55232 A7A1_RS08210 WP_014477369.1 1591471..1592238(+) (recO) [Bacillus subtilis subsp. subtilis str. BSP1]
ATGCTGACAAAATGTGAAGGAATCGTTCTTCGCACAAATGATTACGGAGAGACGAATAAAATCGTAACTTTACTGACAAG
AGAACACGGAAAAATAGGTGTTATGGCACGAGGCGCCAAAAAACCGAACAGCCGTTTATCAGCAGTCAGCCAGCCCTTTT
TGTATGGTTCTTTCTTAATGCAAAAAACATCGGGCCTCGGAACGCTTCAGCAGGGGGAAATGATCCTCAGCATGAGAGGC
ATCAGGGAAGACTTGTTTTTAACAGCATATGCTGCCTATATTGCTGAGTTAGTCGACAGAGGCACAGAAGAAAAAAAGCC
AAATCCTTATTTATTTGAATTCATATTAGAATCATTAAAACAGCTGAATGAAGGAACAGATCCGGATGTTATCACCTTCA
TTGTTCAAATGAAGATGCTCGGTGTCATGGGCCTGTATCCTGAGCTAAATCATTGTGTACATTGTAAAAGCCAAGACGGA
ACCTTTCATTTCTCTGTTCGTGATAATGGTTTTATATGCCACCGCTGTTTTGAAAAAGATCCTTACAGGATACCGATCAA
ACCGCAAACGGCAAGGCTGTTAAGACTCTTTTACTATTTTGATCTGTCGAGGCTCGGCAATGTGTCCTTAAAAGAGGAAA
CAAAAGCTGAATTAAAGCAAGTGATTGATTTATATTACGAAGAATATTCGGGATTGTATTTAAAATCAAAGCGCTTTTTA
GATCAAATGGAAAGCATGAAACATCTTATGGGTGAAAACAAAAGTTGA

Domains

Predicted by InterproScan.

Recombination protein O N terminal (RecO_N)

(1-75)

Recombination protein O C terminal (RecO_C)

(82-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L7G7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Bacillus subtilis subsp. subtilis str. 168

99.608

100

0.996

Multiple sequence alignment