Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   LUV29_RS21720 Genome accession   NZ_CP089592
Coordinates   4153473..4154267 (-) Length   264 a.a.
NCBI ID   WP_003242676.1    Uniprot ID   C0SP91
Organism   Bacillus subtilis strain Bsi     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4148473..4159267
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUV29_RS21695 (LUV29_21695) rocD 4148923..4150128 (-) 1206 WP_003242970.1 ornithine aminotransferase -
  LUV29_RS21700 (LUV29_21700) rocR 4150369..4151754 (+) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  LUV29_RS21705 (LUV29_21705) - 4151736..4151924 (-) 189 Protein_4232 ATP-binding protein -
  LUV29_RS21710 (LUV29_21710) - 4152041..4152169 (-) 129 WP_003242634.1 hypothetical protein -
  LUV29_RS21715 (LUV29_21715) htrA 4152189..4153391 (-) 1203 WP_009969578.1 serine protease HtrC Regulator
  LUV29_RS21720 (LUV29_21720) vicX 4153473..4154267 (-) 795 WP_003242676.1 MBL fold metallo-hydrolase Regulator
  LUV29_RS21725 (LUV29_21725) walI 4154289..4155131 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  LUV29_RS21730 (LUV29_21730) walH 4155118..4156485 (-) 1368 WP_003242498.1 WalRK two-component regulatory system regulator WalH -
  LUV29_RS21735 (LUV29_21735) walK 4156475..4158310 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  LUV29_RS21740 (LUV29_21740) walR 4158318..4159025 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29256.25 Da        Isoelectric Point: 5.8036

>NTDB_id=552280 LUV29_RS21720 WP_003242676.1 4153473..4154267(-) (vicX) [Bacillus subtilis strain Bsi]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=552280 LUV29_RS21720 WP_003242676.1 4153473..4154267(-) (vicX) [Bacillus subtilis strain Bsi]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0SP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53