Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   LUU82_RS10040 Genome accession   NZ_CP089586
Coordinates   2009942..2010742 (-) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain E1185_IV_ST12     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2004942..2015742
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUU82_RS10025 (LUU82_10025) - 2004972..2006228 (-) 1257 WP_000566670.1 MrcB family domain-containing protein -
  LUU82_RS10030 (LUU82_10030) rlmH 2006550..2007029 (-) 480 WP_000704777.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  LUU82_RS10035 (LUU82_10035) adsA 2007397..2009715 (-) 2319 WP_000645749.1 LPXTG-anchored adenosine synthase AdsA -
  LUU82_RS10040 (LUU82_10040) vicX 2009942..2010742 (-) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  LUU82_RS10045 (LUU82_10045) - 2011132..2011920 (-) 789 WP_001104172.1 two-component system regulatory protein YycI -
  LUU82_RS10050 (LUU82_10050) yycH 2011921..2013255 (-) 1335 WP_001060132.1 two-component system activity regulator YycH -
  LUU82_RS10055 (LUU82_10055) walK 2013248..2015074 (-) 1827 WP_232652269.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=552111 LUU82_RS10040 WP_000088649.1 2009942..2010742(-) (vicX) [Staphylococcus aureus strain E1185_IV_ST12]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=552111 LUU82_RS10040 WP_000088649.1 2009942..2010742(-) (vicX) [Staphylococcus aureus strain E1185_IV_ST12]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGAAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTGACGGATACGGGTTACGTGTCGGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAATACGA
AACGTATTTACCTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGTTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474