Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | J4854_RS09735 | Genome accession | NZ_CP072329 |
| Coordinates | 2014554..2016983 (-) | Length | 809 a.a. |
| NCBI ID | WP_200772429.1 | Uniprot ID | A0A9X0WNX4 |
| Organism | Streptococcus lactarius strain CCUG 66490 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2009554..2021983
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J4854_RS09705 (J4854_09705) | - | 2010320..2011096 (-) | 777 | WP_200772832.1 | NUDIX domain-containing protein | - |
| J4854_RS09710 (J4854_09710) | - | 2011097..2011306 (-) | 210 | WP_200772833.1 | hypothetical protein | - |
| J4854_RS09715 (J4854_09715) | - | 2011317..2012378 (-) | 1062 | WP_200772834.1 | AAA family ATPase | - |
| J4854_RS09720 (J4854_09720) | - | 2012537..2013262 (-) | 726 | WP_200772835.1 | hypothetical protein | - |
| J4854_RS09725 (J4854_09725) | - | 2013671..2014078 (-) | 408 | WP_200772431.1 | DUF4430 domain-containing protein | - |
| J4854_RS09730 (J4854_09730) | - | 2014056..2014544 (-) | 489 | WP_200772430.1 | ECF transporter S component | - |
| J4854_RS09735 (J4854_09735) | clpC | 2014554..2016983 (-) | 2430 | WP_200772429.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| J4854_RS09740 (J4854_09740) | - | 2016984..2017448 (-) | 465 | WP_187538347.1 | CtsR family transcriptional regulator | - |
| J4854_RS09745 (J4854_09745) | - | 2018051..2018572 (-) | 522 | WP_200772428.1 | Dps family protein | - |
| J4854_RS09750 (J4854_09750) | - | 2018744..2019214 (+) | 471 | WP_200772427.1 | COG2426 family protein | - |
| J4854_RS09755 (J4854_09755) | tsf | 2019378..2020418 (-) | 1041 | WP_200772426.1 | translation elongation factor Ts | - |
| J4854_RS09760 (J4854_09760) | rpsB | 2020502..2021284 (-) | 783 | WP_003016971.1 | 30S ribosomal protein S2 | - |
| J4854_RS10400 | - | 2021776..2021922 (-) | 147 | WP_234700076.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 89491.04 Da Isoelectric Point: 5.2798
>NTDB_id=552067 J4854_RS09735 WP_200772429.1 2014554..2016983(-) (clpC) [Streptococcus lactarius strain CCUG 66490]
MNYSTALLESIEAAQLLAGHYEGETLDTWHLLTAMANNPYSVAGSVLSDYPMQIDEFQDAAEHITGQVFHSDNSYKVFPF
SYRMEAIMKHATEIAQVLHAKAIGTEHVLLSLLADRGTLASQVMEFAGFAFTEEDKGVPVASLRKNLEVKAGWDKADIKA
IRSLYRTQNPNRQTMGNMMGMPPTTSGGLEDYTRDLTEMARTGQLEPVIGRDAEISRMIQILSRKTKNNPVLVGEAGVGK
TALALGLAQRVASGNVPAEIAQMRVLELDLMNVVAGTRFRGDFEERMNNIIQDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQDEYQKHIEKDAALSRRFAKVTIEEPSVADSIQILQGLKETYQDHHHVTITDEAIET
AVKYAHRYLTSRQLPDSAIDLLDEAAATVQNRDSNGHVKEELTALDRALMDGKWKKAAQLLQVEAAPVVYKKEVTDQDVL
VTLSQLSGIPTQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSE
DMQQVVKVMVKPLISTLAEQGMTLKFLPSALKLLATKGYDPEMGARPLRRVLQTEVEDQLAELLLKGEVQEGQTIKVGTT
AGAVKFEIV
MNYSTALLESIEAAQLLAGHYEGETLDTWHLLTAMANNPYSVAGSVLSDYPMQIDEFQDAAEHITGQVFHSDNSYKVFPF
SYRMEAIMKHATEIAQVLHAKAIGTEHVLLSLLADRGTLASQVMEFAGFAFTEEDKGVPVASLRKNLEVKAGWDKADIKA
IRSLYRTQNPNRQTMGNMMGMPPTTSGGLEDYTRDLTEMARTGQLEPVIGRDAEISRMIQILSRKTKNNPVLVGEAGVGK
TALALGLAQRVASGNVPAEIAQMRVLELDLMNVVAGTRFRGDFEERMNNIIQDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQDEYQKHIEKDAALSRRFAKVTIEEPSVADSIQILQGLKETYQDHHHVTITDEAIET
AVKYAHRYLTSRQLPDSAIDLLDEAAATVQNRDSNGHVKEELTALDRALMDGKWKKAAQLLQVEAAPVVYKKEVTDQDVL
VTLSQLSGIPTQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSE
DMQQVVKVMVKPLISTLAEQGMTLKFLPSALKLLATKGYDPEMGARPLRRVLQTEVEDQLAELLLKGEVQEGQTIKVGTT
AGAVKFEIV
Nucleotide
Download Length: 2430 bp
>NTDB_id=552067 J4854_RS09735 WP_200772429.1 2014554..2016983(-) (clpC) [Streptococcus lactarius strain CCUG 66490]
ATGAACTATTCAACAGCACTGTTAGAAAGTATAGAAGCAGCCCAGCTACTAGCAGGTCATTATGAGGGGGAGACCTTAGA
TACCTGGCATCTCTTGACGGCCATGGCCAATAATCCCTATAGTGTAGCAGGATCTGTCTTGAGTGACTACCCAATGCAGA
TCGACGAGTTCCAGGATGCGGCAGAGCATATTACGGGCCAAGTTTTTCATAGCGACAACAGCTATAAGGTTTTTCCATTT
TCTTATCGAATGGAAGCCATCATGAAACATGCTACAGAGATTGCGCAAGTCCTTCATGCCAAGGCGATTGGAACAGAGCA
TGTCTTGCTCTCTCTTCTTGCAGACCGTGGGACATTGGCGAGTCAAGTCATGGAGTTTGCTGGTTTTGCCTTTACCGAAG
AAGACAAAGGTGTTCCTGTTGCTTCACTTCGTAAAAATTTGGAAGTGAAGGCAGGATGGGACAAGGCTGACATCAAAGCG
ATCCGCAGCCTCTACCGAACTCAAAATCCTAACCGTCAAACCATGGGGAATATGATGGGAATGCCTCCAACGACCAGTGG
TGGGCTTGAGGACTATACCCGTGATTTGACCGAGATGGCCCGTACCGGCCAACTGGAGCCTGTGATCGGTCGTGATGCTG
AGATTTCGCGCATGATCCAAATCCTCAGTCGCAAAACCAAGAACAATCCGGTCTTGGTTGGAGAAGCAGGGGTCGGAAAG
ACTGCTCTTGCATTAGGTCTGGCCCAGCGTGTCGCTAGTGGCAATGTTCCAGCTGAAATCGCGCAAATGCGTGTTCTGGA
ATTGGATCTCATGAATGTAGTGGCAGGGACACGTTTTCGTGGGGATTTTGAAGAACGGATGAACAATATCATCCAGGATA
TCGAAGAAGATGGTCACGTCATTCTCTTTATCGATGAATTGCATACCATTATGGGGTCAGGATCTGGCATTGATTCGACC
TTGGATGCGGCCAATATCCTAAAACCAGCTTTAGCGCGTGGCACACTTCGTACAGTCGGGGCAACGACACAAGATGAGTA
CCAAAAACATATCGAAAAAGACGCGGCACTCTCTCGTCGCTTTGCCAAAGTCACCATTGAAGAGCCTAGTGTCGCTGACA
GCATCCAGATCCTTCAAGGTTTAAAAGAGACCTACCAAGACCACCATCATGTGACCATTACCGATGAAGCGATCGAAACA
GCTGTCAAATATGCCCACCGCTATTTGACCAGCCGTCAATTGCCAGATTCAGCCATTGATCTCTTGGATGAAGCAGCAGC
TACCGTACAAAACCGCGATTCCAACGGTCACGTAAAAGAAGAGTTGACTGCCTTGGATCGGGCCTTGATGGATGGCAAGT
GGAAGAAAGCAGCCCAGCTCTTACAAGTAGAAGCTGCACCGGTTGTCTATAAAAAAGAAGTAACGGATCAGGATGTCTTA
GTGACCTTGAGCCAATTATCTGGTATTCCAACTCAAAAACTGACTCAAACGGATGCCAAGAAGTACCTCAACTTAGAAGC
AGAATTGCACAAGCGCGTGATTGGACAAGACCAAGCCGTTTCGAGCATCAGTCGGGCCATTCGACGGAATCAATCAGGTA
TCCGTAGCAATAAACGTCCGATCGGATCTTTCATGTTCCTAGGCCCTACCGGTGTCGGAAAAACAGAGCTTGCCAAAGCC
TTGGCAGAAGTCCTGTTTGATGATGAATCGGCCCTCATCCGTTTTGATATGAGTGAGTACATGGAAAAATTCGCGGCTAG
CCGCCTCAACGGTGCCCCTCCAGGCTATGTGGGCTACGAAGAAGGGGGCGAATTGACCGAGAAAGTCCGCAACAAGCCTT
ATTCGGTCCTCTTGTTTGATGAGGTGGAAAAAGCGCATCCGGACATTTTCAATGTTCTCTTGCAAGTCTTGGATGATGGG
GTTTTAACCGACAGCAAAGGACGGAAGATCGATTTCTCCAATACCATTATCATCATGACTTCAAACCTTGGTGCAACAGC
CCTTCGAGATGATAAGACAGTCGGCTTTGGTGCCAAGGATATCCGCTTTGACCAGGCCAATATGGAAAAACGCATGTTTG
AAGAATTGAAGAAAACCTATCGTCCAGAGTTTATCAACCGGATTGATGAAAAGGTGGTCTTCCATAGCCTATCAAGCGAA
GACATGCAACAGGTTGTGAAAGTCATGGTGAAACCGCTCATTTCAACCTTGGCCGAACAAGGCATGACCCTCAAATTCCT
GCCGTCTGCGCTTAAGTTGCTTGCGACCAAAGGGTATGATCCTGAAATGGGAGCACGTCCTCTTCGTCGTGTCTTGCAGA
CTGAGGTGGAAGATCAGTTGGCTGAGCTTCTTCTCAAGGGAGAAGTCCAGGAAGGCCAAACGATCAAGGTTGGAACGACA
GCTGGCGCTGTCAAATTTGAAATTGTCTAG
ATGAACTATTCAACAGCACTGTTAGAAAGTATAGAAGCAGCCCAGCTACTAGCAGGTCATTATGAGGGGGAGACCTTAGA
TACCTGGCATCTCTTGACGGCCATGGCCAATAATCCCTATAGTGTAGCAGGATCTGTCTTGAGTGACTACCCAATGCAGA
TCGACGAGTTCCAGGATGCGGCAGAGCATATTACGGGCCAAGTTTTTCATAGCGACAACAGCTATAAGGTTTTTCCATTT
TCTTATCGAATGGAAGCCATCATGAAACATGCTACAGAGATTGCGCAAGTCCTTCATGCCAAGGCGATTGGAACAGAGCA
TGTCTTGCTCTCTCTTCTTGCAGACCGTGGGACATTGGCGAGTCAAGTCATGGAGTTTGCTGGTTTTGCCTTTACCGAAG
AAGACAAAGGTGTTCCTGTTGCTTCACTTCGTAAAAATTTGGAAGTGAAGGCAGGATGGGACAAGGCTGACATCAAAGCG
ATCCGCAGCCTCTACCGAACTCAAAATCCTAACCGTCAAACCATGGGGAATATGATGGGAATGCCTCCAACGACCAGTGG
TGGGCTTGAGGACTATACCCGTGATTTGACCGAGATGGCCCGTACCGGCCAACTGGAGCCTGTGATCGGTCGTGATGCTG
AGATTTCGCGCATGATCCAAATCCTCAGTCGCAAAACCAAGAACAATCCGGTCTTGGTTGGAGAAGCAGGGGTCGGAAAG
ACTGCTCTTGCATTAGGTCTGGCCCAGCGTGTCGCTAGTGGCAATGTTCCAGCTGAAATCGCGCAAATGCGTGTTCTGGA
ATTGGATCTCATGAATGTAGTGGCAGGGACACGTTTTCGTGGGGATTTTGAAGAACGGATGAACAATATCATCCAGGATA
TCGAAGAAGATGGTCACGTCATTCTCTTTATCGATGAATTGCATACCATTATGGGGTCAGGATCTGGCATTGATTCGACC
TTGGATGCGGCCAATATCCTAAAACCAGCTTTAGCGCGTGGCACACTTCGTACAGTCGGGGCAACGACACAAGATGAGTA
CCAAAAACATATCGAAAAAGACGCGGCACTCTCTCGTCGCTTTGCCAAAGTCACCATTGAAGAGCCTAGTGTCGCTGACA
GCATCCAGATCCTTCAAGGTTTAAAAGAGACCTACCAAGACCACCATCATGTGACCATTACCGATGAAGCGATCGAAACA
GCTGTCAAATATGCCCACCGCTATTTGACCAGCCGTCAATTGCCAGATTCAGCCATTGATCTCTTGGATGAAGCAGCAGC
TACCGTACAAAACCGCGATTCCAACGGTCACGTAAAAGAAGAGTTGACTGCCTTGGATCGGGCCTTGATGGATGGCAAGT
GGAAGAAAGCAGCCCAGCTCTTACAAGTAGAAGCTGCACCGGTTGTCTATAAAAAAGAAGTAACGGATCAGGATGTCTTA
GTGACCTTGAGCCAATTATCTGGTATTCCAACTCAAAAACTGACTCAAACGGATGCCAAGAAGTACCTCAACTTAGAAGC
AGAATTGCACAAGCGCGTGATTGGACAAGACCAAGCCGTTTCGAGCATCAGTCGGGCCATTCGACGGAATCAATCAGGTA
TCCGTAGCAATAAACGTCCGATCGGATCTTTCATGTTCCTAGGCCCTACCGGTGTCGGAAAAACAGAGCTTGCCAAAGCC
TTGGCAGAAGTCCTGTTTGATGATGAATCGGCCCTCATCCGTTTTGATATGAGTGAGTACATGGAAAAATTCGCGGCTAG
CCGCCTCAACGGTGCCCCTCCAGGCTATGTGGGCTACGAAGAAGGGGGCGAATTGACCGAGAAAGTCCGCAACAAGCCTT
ATTCGGTCCTCTTGTTTGATGAGGTGGAAAAAGCGCATCCGGACATTTTCAATGTTCTCTTGCAAGTCTTGGATGATGGG
GTTTTAACCGACAGCAAAGGACGGAAGATCGATTTCTCCAATACCATTATCATCATGACTTCAAACCTTGGTGCAACAGC
CCTTCGAGATGATAAGACAGTCGGCTTTGGTGCCAAGGATATCCGCTTTGACCAGGCCAATATGGAAAAACGCATGTTTG
AAGAATTGAAGAAAACCTATCGTCCAGAGTTTATCAACCGGATTGATGAAAAGGTGGTCTTCCATAGCCTATCAAGCGAA
GACATGCAACAGGTTGTGAAAGTCATGGTGAAACCGCTCATTTCAACCTTGGCCGAACAAGGCATGACCCTCAAATTCCT
GCCGTCTGCGCTTAAGTTGCTTGCGACCAAAGGGTATGATCCTGAAATGGGAGCACGTCCTCTTCGTCGTGTCTTGCAGA
CTGAGGTGGAAGATCAGTTGGCTGAGCTTCTTCTCAAGGGAGAAGTCCAGGAAGGCCAAACGATCAAGGTTGGAACGACA
GCTGGCGCTGTCAAATTTGAAATTGTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae TIGR4 |
76.572 |
100 |
0.768 |
| clpC | Streptococcus pneumoniae Rx1 |
76.572 |
100 |
0.768 |
| clpC | Streptococcus pneumoniae D39 |
76.572 |
100 |
0.768 |
| clpC | Streptococcus mutans UA159 |
65.973 |
100 |
0.666 |
| clpC | Streptococcus thermophilus LMG 18311 |
64.908 |
100 |
0.654 |
| clpC | Streptococcus thermophilus LMD-9 |
64.908 |
100 |
0.654 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.421 |
100 |
0.518 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.149 |
99.382 |
0.449 |
| clpE | Streptococcus mutans UA159 |
48.071 |
76.885 |
0.37 |
| clpE | Streptococcus pneumoniae Rx1 |
46.497 |
77.627 |
0.361 |
| clpE | Streptococcus pneumoniae D39 |
46.497 |
77.627 |
0.361 |
| clpE | Streptococcus pneumoniae R6 |
46.497 |
77.627 |
0.361 |
| clpE | Streptococcus pneumoniae TIGR4 |
46.497 |
77.627 |
0.361 |