Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   J4854_RS02415 Genome accession   NZ_CP072329
Coordinates   455953..456684 (+) Length   243 a.a.
NCBI ID   WP_200773006.1    Uniprot ID   A0A9X0WQB2
Organism   Streptococcus lactarius strain CCUG 66490     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 450953..461684
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J4854_RS02385 (J4854_02385) - 451234..452655 (+) 1422 WP_200773011.1 NCS2 family permease -
  J4854_RS02390 (J4854_02390) tsaE 452943..453398 (+) 456 WP_200773010.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  J4854_RS02395 (J4854_02395) - 453391..453921 (+) 531 WP_200773009.1 GNAT family N-acetyltransferase -
  J4854_RS02400 (J4854_02400) brpA 453935..455137 (+) 1203 WP_200773008.1 biofilm formation/cell division transcriptional regulator BrpA -
  J4854_RS02405 (J4854_02405) - 455167..455457 (-) 291 WP_200773007.1 hypothetical protein -
  J4854_RS02410 (J4854_02410) - 455472..455885 (-) 414 WP_187538175.1 HIT family protein -
  J4854_RS02415 (J4854_02415) pptA 455953..456684 (+) 732 WP_200773006.1 ABC transporter ATP-binding protein Regulator
  J4854_RS02420 (J4854_02420) - 456681..457736 (+) 1056 WP_200773005.1 ABC transporter permease -
  J4854_RS02425 (J4854_02425) ccrZ 457777..458571 (+) 795 WP_187538181.1 cell cycle regulator CcrZ -
  J4854_RS02430 (J4854_02430) trmB 458568..459203 (+) 636 WP_200773004.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  J4854_RS02435 (J4854_02435) rimP 459301..459780 (+) 480 WP_200773003.1 ribosome maturation factor RimP -
  J4854_RS02440 (J4854_02440) nusA 459822..460964 (+) 1143 WP_187538188.1 transcription termination factor NusA -
  J4854_RS02445 (J4854_02445) rnpM 460979..461275 (+) 297 WP_003010401.1 RNase P modulator RnpM -
  J4854_RS02450 (J4854_02450) - 461268..461567 (+) 300 WP_187538192.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 243 a.a.        Molecular weight: 26859.13 Da        Isoelectric Point: 4.6076

>NTDB_id=552033 J4854_RS02415 WP_200773006.1 455953..456684(+) (pptA) [Streptococcus lactarius strain CCUG 66490]
MLEINKLTGGYVNIPVLKEVSFSVPDGQLVGLIGLNGAGKSTTINEIIGLLHPYAGEVRIDGLSLPEAPTEYRKKIGYIP
ETPSLYEELTLREHIETVAMAYDLDLDQVMARVQPLLQQFRLAEKLDWFPTQFSKGMKQKVMIICAYAVDPSLYIVDEPF
LGLDPVAIADLIQLLSDEKAKGKSILMSTHVLDSAEKMCDGFVILHKGQVRAKGTLDELRVTFGNEKASLNDIYMTLTEE
GTA

Nucleotide


Download         Length: 732 bp        

>NTDB_id=552033 J4854_RS02415 WP_200773006.1 455953..456684(+) (pptA) [Streptococcus lactarius strain CCUG 66490]
ATGTTAGAAATCAACAAGTTGACAGGGGGCTATGTCAATATCCCTGTCTTGAAAGAGGTGAGCTTTTCAGTACCTGATGG
CCAACTGGTCGGTTTAATTGGCCTAAATGGAGCAGGAAAGTCTACCACGATTAATGAAATTATTGGTCTATTGCATCCGT
ATGCTGGGGAAGTACGGATTGATGGCTTGAGCCTTCCAGAAGCTCCAACGGAATACCGCAAGAAAATTGGTTATATTCCA
GAAACACCGAGTCTGTATGAGGAGCTAACTTTAAGAGAACATATTGAAACAGTAGCCATGGCCTATGATTTAGACCTGGA
TCAAGTAATGGCGCGTGTGCAACCCTTGTTGCAACAGTTCCGCCTTGCTGAAAAATTAGATTGGTTTCCAACCCAGTTTT
CAAAAGGAATGAAGCAGAAGGTCATGATTATTTGCGCCTACGCAGTGGATCCAAGTCTCTATATTGTGGATGAACCCTTT
TTAGGATTGGACCCTGTAGCCATAGCGGATTTGATTCAGTTGCTTTCAGATGAAAAGGCGAAAGGTAAATCCATTTTGAT
GAGTACCCACGTTCTAGATTCGGCTGAAAAAATGTGCGATGGTTTTGTGATCCTTCATAAAGGCCAGGTTCGAGCAAAAG
GAACTTTGGACGAGTTGCGTGTAACGTTTGGAAATGAAAAAGCCAGTTTGAATGATATCTATATGACCTTGACAGAAGAG
GGTACAGCATGA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

75.314

98.354

0.741

  pptA Streptococcus salivarius strain HSISS4

75.314

98.354

0.741