Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   LUV23_RS32520 Genome accession   NZ_CP089536
Coordinates   7851217..7852020 (-) Length   267 a.a.
NCBI ID   WP_069867872.1    Uniprot ID   A0A9X2LWT8
Organism   Streptomyces sp. HNM0561     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 7846217..7857020
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUV23_RS32510 (LUV23_32510) - 7848122..7848820 (+) 699 WP_206333455.1 GNAT family N-acetyltransferase -
  LUV23_RS32515 (LUV23_32515) - 7849080..7851080 (+) 2001 WP_206333456.1 ATP-dependent DNA helicase -
  LUV23_RS32520 (LUV23_32520) dinR/lexA 7851217..7852020 (-) 804 WP_069867872.1 transcriptional repressor LexA Regulator
  LUV23_RS32525 (LUV23_32525) nrdR 7852472..7852993 (+) 522 WP_030842751.1 transcriptional regulator NrdR -
  LUV23_RS32530 (LUV23_32530) - 7853108..7855972 (+) 2865 WP_069867871.1 vitamin B12-dependent ribonucleotide reductase -
  LUV23_RS32535 (LUV23_32535) - 7856160..7856765 (+) 606 WP_069867870.1 YdbC family protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29079.85 Da        Isoelectric Point: 7.0669

>NTDB_id=552016 LUV23_RS32520 WP_069867872.1 7851217..7852020(-) (dinR/lexA) [Streptomyces sp. HNM0561]
MTTTAESATITAQERSQSRLEQTHAMNQTHPMNEDATNPEGQKPTRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRR
GYPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSAQPTDTTGKPAASYVPLVGRIAAGGPI
LAEESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLL
PHNAAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 804 bp        

>NTDB_id=552016 LUV23_RS32520 WP_069867872.1 7851217..7852020(-) (dinR/lexA) [Streptomyces sp. HNM0561]
GTGACCACCACCGCAGAGAGCGCCACTATTACCGCCCAGGAGCGCTCCCAGAGCCGACTCGAACAGACACACGCGATGAA
CCAGACCCACCCGATGAACGAAGACGCCACGAACCCGGAGGGGCAGAAGCCCACGCGATCACTACCAGGGCGACCTCCAG
GCATCCGGGCGGACAGCTCAGGGCTGACCGACCGGCAGCGGCGCGTCATCGAGGTCATTCGCGACTCTGTGCAGCGGCGC
GGTTACCCGCCGTCCATGCGGGAGATCGGCCAGGCGGTGGGCCTCTCCAGCACCTCGTCCGTCGCCCATCAGCTGATGGC
TCTGGAGCGGAAGGGCTTTCTGCGACGCGACCCCCACCGGCCCCGGGCCTACGAGGTCCGCGGCTCCGACCAGCCCAGCG
CCCAGCCCACGGACACCACCGGCAAGCCCGCCGCCTCCTATGTGCCGTTGGTCGGCCGGATCGCGGCCGGTGGGCCGATC
CTCGCCGAGGAGTCGGTCGAGGATGTTTTCCCGCTCCCCCGGCAGCTGGTCGGCGACGGTGAGCTCTTCGTGCTGAAGGT
GGTCGGCGACTCCATGATCGAGGCCGCCATCTGCGACGGGGACTGGGTGACGGTGCGCCGTCAGCCAGTCGCCGAGAACG
GCGACATCGTCGCCGCGATGCTCGACGGTGAGGCCACGGTGAAGCGCTTCAAGCGGGAGGACGGCCATGTGTGGCTGCTC
CCGCACAACGCCGCCTACCAGCCGATCCCCGGCGACGAGGCCACCATTCTGGGCAAGGTGGTCGCGGTGTTGCGGCGCGT
CTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(149-261)

LexA DNA binding domain (LexA_DNA_bind)

(60-123)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9X2LWT8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

79.401

0.367