NTDB

Overview

Name	dinR/lexA	Type	Regulator
Locus tag	LUA14_RS10295	Genome accession	NZ_CP089530
Coordinates	2021381..2022001 (-)	Length	206 a.a.
NCBI ID	WP_007611720.1	Uniprot ID	A0AAI8HP04
Organism	Bacillus amyloliquefaciens strain LS1-002-014s
Function	repressor of recA; repressor of dinR (predicted from homology) Homologous recombination

Genomic Context

Location: 2016381..2027001

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LUA14_RS10260 (LUA14_10260)	-	2017245..2017679 (+)	435	WP_003154017.1	dUTP diphosphatase	-
LUA14_RS10265 (LUA14_10265)	-	2017767..2017867 (-)	101	Protein_1977	DUF4177 domain-containing protein	-
LUA14_RS10270 (LUA14_10270)	-	2018085..2018909 (+)	825	WP_072589127.1	poly-gamma-glutamate hydrolase family protein	-
LUA14_RS10275 (LUA14_10275)	-	2019015..2019164 (+)	150	WP_007410334.1	hypothetical protein	-
LUA14_RS10280 (LUA14_10280)	-	2019151..2019981 (+)	831	WP_007410333.1	prohibitin family protein	-
LUA14_RS10285 (LUA14_10285)	-	2020011..2020460 (-)	450	WP_052827479.1	YndM family protein	-
LUA14_RS10290 (LUA14_10290)	-	2020614..2021042 (+)	429	WP_003154006.1	hypothetical protein	-
LUA14_RS10295 (LUA14_10295)	dinR/lexA	2021381..2022001 (-)	621	WP_007611720.1	transcriptional repressor LexA	Regulator
LUA14_RS10300 (LUA14_10300)	yneA	2022158..2022469 (+)	312	WP_003154001.1	cell division suppressor protein YneA	-
LUA14_RS10305 (LUA14_10305)	-	2022485..2023135 (+)	651	WP_003153998.1	recombinase family protein	-
LUA14_RS10310 (LUA14_10310)	-	2023204..2023437 (+)	234	WP_003153997.1	DUF896 domain-containing protein	-
LUA14_RS10315 (LUA14_10315)	recP/tkt	2023604..2025607 (+)	2004	WP_015239927.1	transketolase	Machinery gene
LUA14_RS10320 (LUA14_10320)	sirA	2025759..2026205 (+)	447	WP_003153995.1	sporulation inhibitor of replication protein SirA	-
LUA14_RS10325 (LUA14_10325)	-	2026291..2026509 (+)	219	WP_003153994.1	YneF family protein	-
LUA14_RS10330 (LUA14_10330)	-	2026583..2026756 (-)	174	WP_012117647.1	aspartyl-phosphate phosphatase Spo0E family protein	-

Sequence

Protein

Download Length: 206 a.a. Molecular weight: 23046.64 Da Isoelectric Point: 5.1645

                                >NTDB_id=551870 LUA14_RS10295 WP_007611720.1 2021381..2022001(-) (dinR/lexA) [Bacillus amyloliquefaciens strain LS1-002-014s]

MTKLSKRQLDILRFIKEEVKTKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEVLDEEEVQIPKSQ

VVNVPVIGKVTAGIPITAVENIDEYFPLPDRMVPPGEHVFMLEIMGESMIDAGIFDKDYVIVKQQNTANNGEIVVAMTED

DEATVKRFYKEDNYVRLQPENPTMEPIILQNVSILGKVIGVFRAVH

Nucleotide

Download Length: 621 bp

                                >NTDB_id=551870 LUA14_RS10295 WP_007611720.1 2021381..2022001(-) (dinR/lexA) [Bacillus amyloliquefaciens strain LS1-002-014s]

ATGACGAAGCTATCAAAAAGGCAGCTTGATATCCTGCGTTTTATTAAAGAAGAGGTAAAAACGAAAGGATATCCGCCTTC

TGTAAGAGAGATAGGAGAAGCAGTAGGACTGGCTTCCAGTTCAACCGTGCACGGCCATTTGGCGCGGCTGGAGACAAAAG

GCCTGATCAGACGGGACCCAACTAAACCGAGGGCGATTGAGGTATTGGATGAAGAAGAAGTCCAAATTCCGAAAAGCCAG

GTCGTAAACGTTCCGGTCATCGGGAAAGTGACGGCGGGTATTCCGATTACGGCTGTTGAAAATATCGACGAGTATTTTCC

GCTTCCTGACCGGATGGTTCCTCCGGGCGAACATGTCTTTATGTTAGAAATCATGGGAGAAAGTATGATCGACGCCGGCA

TTTTTGACAAAGATTACGTCATTGTCAAACAGCAGAACACGGCCAATAACGGAGAAATCGTCGTAGCTATGACCGAAGAT

GATGAAGCGACGGTCAAGCGCTTCTATAAAGAAGACAATTATGTGCGGCTGCAGCCGGAAAATCCGACGATGGAGCCGAT

TATCCTGCAAAACGTAAGCATTTTGGGGAAAGTTATCGGCGTATTCAGAGCCGTACATTAA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(85-199)

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0AAI8HP04

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
dinR/lexA	Bacillus subtilis subsp. subtilis str. 168	92.718	100	0.927

Detailed information NTG0551870