Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   J4774_RS19265 Genome accession   NZ_CP072310
Coordinates   2486249..2486413 (+) Length   54 a.a.
NCBI ID   WP_269465305.1    Uniprot ID   -
Organism   Bacillus velezensis strain AD8     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2481249..2491413
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J4774_RS19260 srfAB 2483140..2486232 (+) 3093 Protein_2407 surfactin non-ribosomal peptide synthetase SrfAB -
  J4774_RS19265 comS 2486249..2486413 (+) 165 WP_269465305.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6264.26 Da        Isoelectric Point: 11.7559

>NTDB_id=551857 J4774_RS19265 WP_269465305.1 2486249..2486413(+) (comS) [Bacillus velezensis strain AD8]
MRPRRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=551857 J4774_RS19265 WP_269465305.1 2486249..2486413(+) (comS) [Bacillus velezensis strain AD8]
ATGAGACCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5