Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   J4774_RS17655 Genome accession   NZ_CP072310
Coordinates   3507870..3508466 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain AD8     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3502870..3513466
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J4774_RS17625 - 3503084..3503539 (+) 456 WP_003154599.1 flavodoxin -
  J4774_RS17630 dapD 3503621..3504331 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  J4774_RS17635 - 3504402..3505526 (+) 1125 WP_014304923.1 N-acetyldiaminopimelate deacetylase -
  J4774_RS17640 - 3505587..3505832 (+) 246 WP_139890271.1 YkuS family protein -
  J4774_RS17645 - 3505866..3506672 (-) 807 WP_003154595.1 mechanosensitive ion channel family protein -
  J4774_RS17650 - 3506960..3507418 (+) 459 WP_024085241.1 TlpA disulfide reductase family protein -
  J4774_RS17655 rok 3507870..3508466 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  J4774_RS17660 - 3508487..3509479 (-) 993 WP_139890270.1 sporulation protein -
  J4774_RS17665 - 3509625..3510227 (+) 603 WP_003154587.1 molybdenum cofactor guanylyltransferase -
  J4774_RS17670 - 3510279..3511298 (+) 1020 WP_003154586.1 molybdopterin-synthase adenylyltransferase MoeB -
  J4774_RS17675 glp 3511316..3512608 (+) 1293 WP_139890269.1 gephyrin-like molybdotransferase Glp -
  J4774_RS17680 mobB 3512569..3513090 (+) 522 WP_015388301.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=551851 J4774_RS17655 WP_003154591.1 3507870..3508466(+) (rok) [Bacillus velezensis strain AD8]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=551851 J4774_RS17655 WP_003154591.1 3507870..3508466(+) (rok) [Bacillus velezensis strain AD8]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCGCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843