Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   J4774_RS17555 Genome accession   NZ_CP072310
Coordinates   3491992..3492456 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain AD8     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3486992..3497456
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J4774_RS17535 - 3487472..3489292 (+) 1821 WP_003154628.1 PAS domain-containing protein -
  J4774_RS17540 - 3489318..3490487 (-) 1170 WP_007611083.1 aminotransferase A -
  J4774_RS17545 - 3490688..3490849 (-) 162 WP_007409608.1 hypothetical protein -
  J4774_RS17550 cheV 3491038..3491949 (+) 912 WP_014304917.1 chemotaxis protein CheV -
  J4774_RS17555 kre 3491992..3492456 (-) 465 WP_003154622.1 YkyB family protein Regulator
  J4774_RS17560 - 3492579..3493871 (-) 1293 WP_043867050.1 MFS transporter -
  J4774_RS17565 - 3493947..3494441 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  J4774_RS17570 - 3494516..3495379 (-) 864 WP_139890273.1 metallophosphoesterase -
  J4774_RS17575 fadH 3495523..3496287 (+) 765 WP_139890272.1 2,4-dienoyl-CoA reductase -
  J4774_RS19370 - 3496398..3496946 (+) 549 Protein_3430 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=551850 J4774_RS17555 WP_003154622.1 3491992..3492456(-) (kre) [Bacillus velezensis strain AD8]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=551850 J4774_RS17555 WP_003154622.1 3491992..3492456(-) (kre) [Bacillus velezensis strain AD8]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929