Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   J4774_RS05970 Genome accession   NZ_CP072310
Coordinates   1239728..1240714 (-) Length   328 a.a.
NCBI ID   WP_269321599.1    Uniprot ID   -
Organism   Bacillus velezensis strain AD8     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 1234728..1245714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J4774_RS05935 - 1234984..1235460 (+) 477 WP_003152059.1 Na+/H+ antiporter subunit E -
  J4774_RS05940 - 1235460..1235744 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  J4774_RS05945 mnhG 1235728..1236102 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  J4774_RS05950 - 1236142..1236525 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  J4774_RS05955 comA 1236547..1237191 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  J4774_RS05960 comP 1237272..1239575 (-) 2304 WP_003152050.1 histidine kinase Regulator
  J4774_RS05965 comX 1239595..1239774 (-) 180 WP_306383677.1 competence pheromone ComX -
  J4774_RS05970 comQ 1239728..1240714 (-) 987 WP_269321599.1 class 1 isoprenoid biosynthesis enzyme Regulator
  J4774_RS05975 degQ 1240845..1240985 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  J4774_RS05980 - 1241451..1241792 (+) 342 WP_014305721.1 hypothetical protein -
  J4774_RS05985 - 1241799..1243019 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -
  J4774_RS05990 - 1243149..1244615 (-) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -
  J4774_RS05995 - 1244633..1245184 (-) 552 WP_052586496.1 isochorismatase family cysteine hydrolase -
  J4774_RS06000 - 1245281..1245679 (-) 399 WP_003152031.1 DUF1694 domain-containing protein -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 37795.36 Da        Isoelectric Point: 5.6937

>NTDB_id=551807 J4774_RS05970 WP_269321599.1 1239728..1240714(-) (comQ) [Bacillus velezensis strain AD8]
MKTIIEQMCLDANQIKNRMKSIIERNIFNEHLMQLLLRFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLT
SDIIDDLEDEDNRDAPWMKIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPETEDECLE
VIKLKCGSLFALANVTGTLLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQEL
LRIFSDQKLYSQLRLNKKEFIQKLYDSGASQYVSVLYQLYMHKCGTEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEF
NKLFFELS

Nucleotide


Download         Length: 987 bp        

>NTDB_id=551807 J4774_RS05970 WP_269321599.1 1239728..1240714(-) (comQ) [Bacillus velezensis strain AD8]
GTGAAGACAATTATTGAGCAAATGTGTTTAGATGCCAACCAAATCAAGAATAGAATGAAGAGTATAATAGAGCGGAACAT
ATTTAATGAACATCTAATGCAGCTCCTTCTTCGTTTTATTGAACCAAAAAAAAATTTTTCTCTAGCTGAATCAGCTGTTT
TGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTGCCGCTATTGAAATTCTTACACTTACT
TCCGATATAATTGATGACCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATGAAGATAGATCGTTCACTAGCATTAAG
TGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTACGAATCCTTTAGTGATTAAGTATGTAT
TAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAACCAGAGACAGAAGATGAATGTTTAGAG
GTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACGCTTTTAGCAACTGGAGAATTCAATAA
GTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGTGATTATCATGCTATTTTTAAGGATAATA
CTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCTTGTTTAATAAGTCTTCTCAAGAATTG
CTTCGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAAGAGTTTATTCAAAAGCTGTATGATTC
TGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGGAACTGAAGTTGAAAATTTAAATTTAG
ATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATAAGAAGGATGATGAAGATGCAGAATTT
AATAAATTATTTTTTGAATTATCCTGA

Domains


Predicted by InterproScan.

(59-245)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

61.246

88.11

0.54