Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   LUY95_RS04200 Genome accession   NZ_CP089506
Coordinates   793655..794278 (+) Length   207 a.a.
NCBI ID   WP_001208760.1    Uniprot ID   Q93SM0
Organism   Staphylococcus aureus strain 0.0066_IIV_ST239     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 788655..799278
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUY95_RS04170 - 789629..790096 (-) 468 WP_000966146.1 CcdC family protein -
  LUY95_RS04175 - 790190..790288 (-) 99 WP_016187065.1 hypothetical protein -
  LUY95_RS04180 - 790275..790517 (-) 243 WP_000246909.1 YneF family protein -
  LUY95_RS04185 recP/tkt 790795..792783 (-) 1989 WP_000481454.1 transketolase Machinery gene
  LUY95_RS04190 - 792904..793143 (-) 240 WP_000071351.1 DUF896 domain-containing protein -
  LUY95_RS04195 sosA 793279..793512 (-) 234 WP_000499651.1 DNA damage-induced cell division inhibitor SosA -
  LUY95_RS04200 dinR/lexA 793655..794278 (+) 624 WP_001208760.1 transcriptional repressor LexA Regulator
  LUY95_RS04205 - 794658..795674 (-) 1017 WP_001798092.1 CAP domain-containing protein -
  LUY95_RS04210 guaC 795696..796673 (-) 978 WP_000688127.1 GMP reductase -
  LUY95_RS04215 rpsN 796830..797099 (-) 270 WP_001085657.1 30S ribosomal protein S14 -
  LUY95_RS04220 rpmG 797553..797702 (-) 150 WP_001265708.1 50S ribosomal protein L33 -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23301.46 Da        Isoelectric Point: 4.8811

>NTDB_id=551736 LUY95_RS04200 WP_001208760.1 793655..794278(+) (dinR/lexA) [Staphylococcus aureus strain 0.0066_IIV_ST239]
MRELTKRQSEIYNYIKQVVQTKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=551736 LUY95_RS04200 WP_001208760.1 793655..794278(+) (dinR/lexA) [Staphylococcus aureus strain 0.0066_IIV_ST239]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAACGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATCGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q93SM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657