Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   J6I82_RS03485 Genome accession   NZ_CP072300
Coordinates   706926..711446 (+) Length   1506 a.a.
NCBI ID   WP_045543733.1    Uniprot ID   A0A090B0N2
Organism   Acinetobacter baumannii strain KSK20     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 701926..716446
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J6I82_RS03460 (J6I82_03460) - 702367..703005 (-) 639 WP_004739833.1 hypothetical protein -
  J6I82_RS03465 (J6I82_03465) pilG 703288..703671 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  J6I82_RS03470 (J6I82_03470) - 703695..704057 (+) 363 WP_000101096.1 PleD family two-component system response regulator -
  J6I82_RS03475 (J6I82_03475) - 704118..704654 (+) 537 WP_045543731.1 chemotaxis protein CheW -
  J6I82_RS03480 (J6I82_03480) - 704701..706779 (+) 2079 WP_045543732.1 methyl-accepting chemotaxis protein -
  J6I82_RS03485 (J6I82_03485) chpA 706926..711446 (+) 4521 WP_045543733.1 Hpt domain-containing protein Regulator
  J6I82_RS03490 (J6I82_03490) - 711443..711907 (+) 465 WP_045543734.1 hypothetical protein -
  J6I82_RS03495 (J6I82_03495) dapE 711943..713079 (-) 1137 WP_001016582.1 succinyl-diaminopimelate desuccinylase -
  J6I82_RS03500 (J6I82_03500) - 713205..713348 (-) 144 WP_001984826.1 entericidin A/B family lipoprotein -
  J6I82_RS03505 (J6I82_03505) - 713447..714355 (-) 909 WP_002124206.1 DUF1853 family protein -
  J6I82_RS03510 (J6I82_03510) - 714460..714828 (+) 369 WP_001259501.1 YbaN family protein -
  J6I82_RS03515 (J6I82_03515) elsL 714979..715482 (+) 504 WP_000077301.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1506 a.a.        Molecular weight: 171695.91 Da        Isoelectric Point: 4.3239

>NTDB_id=551700 J6I82_RS03485 WP_045543733.1 706926..711446(+) (chpA) [Acinetobacter baumannii strain KSK20]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFIEEIEEIFVDLQPLINKWMQSENIATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLQLTPTIQSYVQLVFKFYSLKLVDNFKQKRVHTLDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLTAETVTGLELDYIEQDSLAEPIIQATHTEIEINLDETLTLFMEEAEEHLATIHQFLDQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSHSEEILLLQEYREFVRDSLELLSRYSSSEQLEARLQQFNQFWDAYVEQ
HGDRTDPLMPSHGLVSQLLQLDVSELLDAELDFEKGIRNEFPDYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKESYEV
LLDKPALLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGVVKQHQSILEELKLYTQYIPDLSNDLPQQDSTSFEPISNIEP
EPEVVATVENFSDSADWAVLGQSVQQDRQYISSTQVNRNFDADLLDIFLEEAEELLEGIDTDLNIWVGEQENFAALNNLM
RYLHTLKGGANMVQATYLGLIAHELESIYERLIQKQLVATSDLIDFIRLVQDDLADRLQIMREQQLDYAAPYTINALKRA
GQNSNFQPVSVVEAFDAESEVFSEQEVISEIIIDEIPVELEPALAKLETHHDQVFDTAVTELATPVEVITSVTSQENEVA
ADEQDIEAVVEQTFLEEATELLEMAESLLKQWFEQRTNRSILLQLQRAVHSLKGGARMVGLEAVQAIAYQLENAFEQFAL
HHFNSNIYDHLLESAIAWLKDAIFNHNYQHFDGLQQSLENIQFFETTIQIPTKLTRADLFNSEPVMTFIQGDGTEPPPMM
GAWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFSHTLVEMELAIQRLADQLRRMEGELETQIIAKH
GIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSDKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLLP
RLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRAQRQQANKPETGRIELNIQRQGTDV
VVVFSDDGQGIDVEKVRQKALLAGLIKPEQDLEQQDILQLIFHPGLSTAEQVTQISGRGVGLDVVQSDIKSLGGHVSVES
VYGQGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIIRVSPASLEQYFESPQELFEYENKRYPLRYLSEFVGNQP
IPRLNGVMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQST
RRHKQLSEAVYRQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFE
VLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVAFESEVKS

Nucleotide


Download         Length: 4521 bp        

>NTDB_id=551700 J6I82_RS03485 WP_045543733.1 706926..711446(+) (chpA) [Acinetobacter baumannii strain KSK20]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAGATCTTCATTGAAGAAATTGAAGAGATTTTTGTTGATTTGCAACCTTTGATAAATAAATGGATGCAGTCTGAGAATA
TTGCTACGCTCACTGAAATTCGTCGTCATTTCCATACCTTAAAAGGTTCCGGAAGAATGATTGGCGCTAAATCTTCAGCT
GAGCTTGCGTGGACAGTTGAAGATACACTCAACCGGGTAATCAACCAAAGCTTACAATTAACGCCAACTATTCAGAGCTA
TGTGCAGTTAGTATTTAAGTTCTATTCCCTTAAATTAGTAGATAATTTTAAGCAAAAACGAGTACATACCTTAGATTTCA
GACCTCTTATTTTATTAGGTCAACAACTACAACAACAGCAAAGTTTAGAACCAGCTTTAGAAGAGCTTTTACAACTTTCA
AATACGCTTACGGCCGAAACAGTGACTGGTCTTGAGCTAGATTATATTGAACAAGATTCGTTAGCCGAGCCAATCATTCA
AGCTACACATACTGAAATTGAAATAAATCTAGATGAAACTTTGACCTTATTTATGGAAGAGGCGGAAGAACATTTAGCCA
CGATTCATCAATTTTTGGATCAAGAGTTACATCAGTATGACAGTTACAATGCTTTAATACGTGCTTTACATACTTTGCGT
GGTAGCTCTGCAATGGCGCAGGTCGAAACAATTTTCGAGGCCAGTACCAAAGTTGAGCATTTATTTAAAATACTACTGCA
AGAAGAGTTATCTTCTCACTCTGAAGAAATTTTATTATTACAAGAATATCGTGAGTTTGTTCGAGATAGCTTGGAACTAC
TATCTAGATATAGTTCAAGTGAACAGCTCGAAGCGAGATTGCAGCAATTTAATCAATTTTGGGATGCATATGTTGAGCAA
CATGGTGACCGAACAGATCCGTTAATGCCTTCTCATGGCTTGGTATCGCAATTATTACAATTAGATGTTTCTGAATTATT
GGATGCAGAATTAGATTTTGAGAAGGGAATTCGTAATGAGTTTCCTGATTATCTTGAACGCCTAAGTGAACAGGCTGATT
TATTACTGCAACATACACATTCTCAAGCAATGCTGGGTTTACATGAATATACCAGCCAACTTAAAGAAAGTTATGAAGTA
CTGCTTGATAAACCTGCGTTATTACAATCAGACTATATATTTGAAATTTATCAAAAAGCACATCAACAGCTCATTCAATT
ATTTGATGCTTTAGCTGCTGGTCAGCGAGTCGGTGTTGTTAAGCAACATCAAAGTATTTTAGAAGAATTAAAACTTTATA
CGCAATACATTCCAGACCTATCAAATGACCTGCCTCAGCAGGATTCGACATCTTTTGAACCAATATCCAATATTGAACCA
GAGCCAGAAGTAGTAGCTACTGTAGAGAATTTCTCAGACTCTGCAGACTGGGCGGTATTAGGTCAAAGTGTGCAGCAAGA
TCGACAATATATTTCATCTACACAAGTGAATCGAAATTTTGATGCTGATCTTTTAGATATCTTTCTTGAGGAAGCTGAAG
AATTACTTGAGGGAATTGATACCGATCTTAATATTTGGGTAGGTGAGCAAGAAAACTTTGCAGCTCTGAACAACCTAATG
CGTTATTTGCATACCTTGAAAGGGGGAGCAAATATGGTTCAGGCAACGTATCTTGGTTTGATTGCCCATGAATTAGAAAG
CATTTATGAGCGTTTAATTCAAAAGCAATTAGTAGCAACTTCAGATTTAATTGATTTTATTCGTTTGGTTCAAGATGACT
TGGCTGATCGTTTACAAATCATGCGTGAACAACAACTAGATTATGCAGCTCCTTACACAATTAACGCATTAAAACGAGCG
GGTCAAAACTCTAACTTCCAACCTGTATCAGTGGTTGAGGCATTTGATGCTGAAAGTGAGGTATTCTCTGAGCAAGAGGT
GATATCTGAAATAATAATAGATGAGATACCAGTAGAACTTGAACCTGCTCTTGCAAAGCTAGAAACTCATCACGATCAGG
TATTCGATACAGCGGTTACCGAGTTAGCTACTCCAGTTGAAGTAATTACCTCGGTTACATCGCAAGAGAATGAAGTTGCA
GCTGATGAACAGGACATTGAGGCTGTTGTTGAACAGACGTTCCTAGAAGAAGCTACTGAATTGTTAGAAATGGCTGAGTC
ACTATTAAAACAATGGTTTGAACAGCGTACAAACCGTAGTATTTTGCTTCAACTACAAAGAGCCGTGCACAGTTTGAAAG
GTGGTGCACGAATGGTGGGTCTAGAAGCCGTACAAGCAATTGCCTACCAGCTAGAAAATGCTTTTGAACAATTTGCGCTA
CATCACTTCAATTCGAATATTTATGATCATTTATTAGAAAGTGCGATTGCATGGTTAAAAGATGCAATTTTCAACCACAA
CTATCAGCATTTCGATGGATTACAGCAAAGTTTAGAAAATATTCAATTCTTTGAAACTACAATCCAGATTCCGACTAAGT
TAACTAGAGCGGACTTGTTTAACTCAGAACCGGTGATGACCTTTATACAAGGTGATGGTACAGAGCCTCCACCAATGATG
GGAGCATGGGAGCAAACAGAGCGTCTGGATCAGAATAATGAAATGATCCGTGTTTCAGCTGACTTAATCGAGAAAATGAT
TGATTTGTCTGGTGAAAACTCCATTAACCGTTCACGAATTGAAATGGACCTAAGCCAATTTAGCCATACACTAGTTGAAA
TGGAGTTGGCGATTCAACGACTTGCCGATCAGTTGCGACGAATGGAAGGTGAGTTAGAAACACAGATTATTGCTAAACAT
GGAATTGAACATTCTCGTTATACTGACTTTGACCCATTAGAGATGGACCAATATTCATCTTTAAATCAATTGTCGAAATC
GCTTGCTGAATCTGCATCGGACTTGGTCGACTTTAAAAATACGTTATCTGACAAAATCAGAGATACCGAAAGTTTGCTTT
TACAACAATCACGAATTCAAGCGGAAATTCAAGAAGGTTTAATGCGGACACGTTTGGTCCCATTTTCGCGTTTATTGCCG
CGTTTACAACGAATTGTTCGTCAGACGTCTACAGCATTGAATAGACCTGCTGAGCTTTTCGTAAATAATACGGAAGGTGA
GTTGGACCGCAATATTTTAGAACGGTTAGTGACTCCGCTTGAGCATATGCTCAGAAACGCAATTGACCATGGTTTAGAAG
ACCGAGCGCAGCGGCAACAAGCAAATAAACCGGAAACAGGGCGTATTGAACTTAATATTCAGCGTCAAGGTACGGATGTT
GTGGTTGTCTTTAGCGATGATGGTCAAGGCATTGATGTTGAAAAAGTACGTCAGAAAGCACTCCTTGCTGGATTGATCAA
GCCAGAACAAGACTTAGAACAGCAAGACATACTGCAACTCATTTTCCATCCGGGTTTAAGTACAGCAGAGCAAGTCACTC
AGATTTCCGGACGTGGTGTAGGTCTTGATGTCGTGCAGAGTGATATTAAGTCTTTGGGGGGACATGTCAGCGTTGAATCC
GTCTATGGGCAGGGAACAACATTTACGATTCGCGTACCGACTACAGTAGCGGTAAGTGATGCCTTAATGGTGAAAGTGGC
TGATCAACAATTTGCGATTCCACTCGCTCAAATCGATCGAATTATTCGAGTGTCACCAGCCTCTTTAGAGCAGTATTTTG
AAAGTCCTCAAGAACTATTTGAGTATGAAAATAAACGTTATCCATTACGTTATCTTTCTGAATTTGTTGGTAACCAACCT
ATACCACGTTTAAATGGTGTGATGTATTCATTACCTGTATTAATGATTAAAGCCAATAATGGCCAAACTGTGGCACTACT
TGTTGACCAGTTAATTGGCTCTCGAGCACAAATTGTAGTGAAACCAATTGGTCAACAGTTCTCTAGCATTGGAGCAATTG
CAGGCGCCACAATTTTAGGTGATGGACAGGTCTGCTTAATTTTAGATGGACAAAATATTGCGCGACAAATTCAGTCAACT
CGGCGTCATAAACAACTTAGTGAAGCAGTGTATAGACAACGAGAGTCTGATGAACGCCGCCTCATCATGATTGTAGATGA
CTCAGTAACTGTACGTAAGGTCACGTCCCGATTGCTTGAACGTCAAGGCTATGATGTGGTTACGGCTAAAGATGGTGTTG
ATGCCATAGAGCAGTTAGAAAATATTAAGCCAGATTTGATGCTACTTGATATTGAAATGCCACGTATGGATGGTTTTGAG
GTTCTCAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACATCCAGAACAGGTGAAAAACA
TCGTGAACGAGCATTCTCGTTAGGTGTGAGTCAATATATGGGTAAACCTTTCCAGGAAGAAGAGTTACTAGAGAATATTG
ATGCTTTACTTGTAGCGTTTGAAAGTGAGGTCAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

98.738

100

0.987