Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   LUY96_RS10840 Genome accession   NZ_CP089502
Coordinates   2151308..2152108 (-) Length   266 a.a.
NCBI ID   WP_000088648.1    Uniprot ID   A0A0H2XG71
Organism   Staphylococcus aureus strain 3488_VV_ ST8     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2146308..2157108
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUY96_RS10825 - 2146337..2147593 (-) 1257 WP_000566670.1 MrcB family domain-containing protein -
  LUY96_RS10830 rlmH 2147915..2148394 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  LUY96_RS10835 adsA 2148762..2151080 (-) 2319 WP_000645780.1 LPXTG-anchored adenosine synthase AdsA -
  LUY96_RS10840 vicX 2151308..2152108 (-) 801 WP_000088648.1 MBL fold metallo-hydrolase Regulator
  LUY96_RS10845 - 2152498..2153286 (-) 789 WP_001104172.1 two-component system regulatory protein YycI -
  LUY96_RS10850 yycH 2153287..2154621 (-) 1335 WP_001060131.1 two-component system activity regulator YycH -
  LUY96_RS10855 walK 2154614..2156440 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30327.55 Da        Isoelectric Point: 6.3392

>NTDB_id=551602 LUY96_RS10840 WP_000088648.1 2151308..2152108(-) (vicX) [Staphylococcus aureus strain 3488_VV_ ST8]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAAHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=551602 LUY96_RS10840 WP_000088648.1 2151308..2152108(-) (vicX) [Staphylococcus aureus strain 3488_VV_ ST8]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGAAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGCTCATGCAATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGACAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XG71

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.416

96.617

0.477