Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   LUY96_RS02790 Genome accession   NZ_CP089502
Coordinates   541489..542112 (-) Length   207 a.a.
NCBI ID   WP_001208760.1    Uniprot ID   Q93SM0
Organism   Staphylococcus aureus strain 3488_VV_ ST8     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 536489..547112
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUY96_RS02770 rpmG 538065..538214 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  LUY96_RS02775 rpsN 538668..538937 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  LUY96_RS02780 guaC 539094..540071 (+) 978 WP_000688126.1 GMP reductase -
  LUY96_RS02785 - 540093..541109 (+) 1017 WP_001789887.1 CAP domain-containing protein -
  LUY96_RS02790 dinR/lexA 541489..542112 (-) 624 WP_001208760.1 transcriptional repressor LexA Regulator
  LUY96_RS02795 sosA 542255..542488 (+) 234 WP_000499647.1 DNA damage-induced cell division inhibitor SosA -
  LUY96_RS02800 - 542624..542863 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  LUY96_RS02805 recP/tkt 542984..544972 (+) 1989 WP_015581833.1 transketolase Machinery gene
  LUY96_RS02810 - 545250..545492 (+) 243 WP_000246909.1 YneF family protein -
  LUY96_RS02815 - 545479..545577 (+) 99 WP_001789897.1 hypothetical protein -
  LUY96_RS02820 - 545671..546138 (+) 468 WP_000966142.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23301.46 Da        Isoelectric Point: 4.8811

>NTDB_id=551552 LUY96_RS02790 WP_001208760.1 541489..542112(-) (dinR/lexA) [Staphylococcus aureus strain 3488_VV_ ST8]
MRELTKRQSEIYNYIKQVVQTKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=551552 LUY96_RS02790 WP_001208760.1 541489..542112(-) (dinR/lexA) [Staphylococcus aureus strain 3488_VV_ ST8]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAACGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTAGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q93SM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657